Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 seq25 109 5e-19 >seq1 Length=3640883 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| ||||| || ||| | ||||| |||| || ||||| || Sbjct 1684875 ATGCAAATCTTTGTGAAGACCTTGACAGGGAAAACGATCACTCTCGAGGTCGAGTCTTCC 1684934 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || ||||| ||| Sbjct 1684935 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAA 1684994 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||||||||| | || || | ||| ||| | ||||| ||| Sbjct 1684995 CAGCGCCTGATCTTCGCCGGCAAACAGCTCGAGGACGGTCGTACTCTTTCTGATTATAAT 1685054 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || || ||| | || || Sbjct 1685055 ATTCAGAAGGAGTCTACTCTTCATCTCGTTCT 1685086 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || | ||||| | || || || || ||| Sbjct 1684594 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACTCTTGAGGTCGAATCTTCT 1684653 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| ||| ||| ||||| || || ||||| |||||||| Sbjct 1684654 GACACAATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 1684713 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || || || ||| | || |||| ||| || | |||||||| Sbjct 1684714 CAGCGCCTGATTTTCGCTGGAAAGCAACTCGAGGATGGTCGTACACTTTCTGATTACAAC 1684773 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || || || || || || || ||| Sbjct 1684774 ATCCAGAAGGAGTCTACTCTTCAT 1684797 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || | ||||| | || |||||||| ||| Sbjct 1684313 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACGATCACGCTGGAGGTGGAGTCCTCT 1684372 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| |||| || ||| || || || || ||||| ||||| Sbjct 1684373 GACACAATTGATAACGTCA---AAGC-CAAGATCCAAGATAAGGAGGGCATTCCCCCTGA 1684428 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || || || | || || || || || || || ||||||| ||| || || ||||| Sbjct 1684429 TCAGCAACGTCTCATCTTCGCTGGGAAGCAGTTGGAAGATGGTCGGACGTTGTCGGATTA 1684488 Query 25175 CAATATTCAAAAAGAATCCACGCTACAT 25202 ||| ||||| || || || || || ||| Sbjct 1684489 CAACATTCAGAAGGAGTCGACACTTCAT 1684516 >seq25 Length=839721 Score = 109 bits (120), Expect = 5e-19 Identities = 151/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| |||| || || | || || | || || |||||||| Sbjct 327077 AATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTC 327018 Query 25058 TGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| | || ||||| | || | ||| ||||| || || || || |||||| Sbjct 327017 GGACACCATCGA-TAACGTGAAGGCGAAGATTCAG-GACAAGGAGGGCATCCCTCCTGAC 326960 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || ||||| ||||| ||||| || |||| |||||| | |||||| Sbjct 326959 CAACAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTAC 326900 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || ||||| || ||| ||| || || Sbjct 326899 AACATTCAGAAGGAAAGCACTCTCCA 326874 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| ||||| | ||||| |||| || |||||||| Sbjct 326792 ATGCAGATTTTCGTTAAGACGTTGACTGGTAAGACGATCACCCTCGAGGTTGAGTCGTCG 326733 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| | || || | ||| || || || || ||||| || || Sbjct 326732 GACACCATCGACAACGTCA---AGGCGAAGATTCAG-GATAAGGAGGGCATTCCTCCGGA 326677 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || ||||||||||| || | || || | ||| || | ||| || Sbjct 326676 CCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTTTCCGACTA 326617 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 |||||| || || || |||||| || Sbjct 326616 CAATATCCAGAAGGAGAGCACGCTTCA 326590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327329289505