Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 181 1e-40 >seq3 Length=2745113 Score = 181 bits (200), Expect = 1e-40 Identities = 377/558 (68%), Gaps = 5/558 (1%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || || |||||||| || | ||| ||||| || || | ||| || ||| || | Sbjct 2542920 CATGCGAAGTCGGTGTGCATACCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGTGAGG 2542861 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | ||||| || ||||||||||| ||||| || || ||| || || ||||| Sbjct 2542860 CCAGGCATGAGTCCACGCTTCTTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAAAAAG 2542801 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT-ACTGCT 93270 ||||| || ||||| || || ||||||| ||| || || ||| | | || | | | Sbjct 2542800 ATACCCTCTACGGCGGCGAAAGCCACAAGACGCTCAGCGAAAGAAGAGCTCTTGTCAGAT 2542741 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 ||||| |||||||| || || || ||||| || ||||| | || ||||| |||| Sbjct 2542740 -ATCCAGCGCAAAGCCCAGTCTGCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGCGTC 2542682 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 || |||| || |||| || | || || || || ||||| ||||| || || | Sbjct 2542681 GAACAGGTGTTCGCGCTGCTCGGGGTCCTTGATATAGGTGTCGATCAACAGCGAGTAGGT 2542622 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || || |||| |||||||| ||| ||||| |||||||| || | || || | | Sbjct 2542621 CTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCAGCGTGCCTCAGCGGC 2542562 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 ||| || || | || || | ||| || || || |||||||| ||||| || || || || Sbjct 2542561 CTGAACCTCGTTGGAGAAACGCTCGACAAGGTTCTCATTGACGATACCGTCCGACGCGGC 2542502 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCA 93567 |||||| || | | ||| || ||| ||| || | || | | || | ||| Sbjct 2542501 AAAAAACGCGAGGACATGGGAGATGAAAAAGCGCTCGTCGGCATTGAGACGATTGTTCCA 2542442 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 ||| | ||| || || ||||| | || || ||||||| || || ||||| || || Sbjct 2542441 GTCGTGCATATCCTTGGAGAGATCCATCTCCTCTGCAGTCCAGAAGGAAGCTTCCGCCTT 2542382 Query 93628 TTTGTACATATCCCATAT 93645 |||||||| | ||| || Sbjct 2542381 CTTGTACATGTTCCAAAT 2542364 Score = 179 bits (198), Expect = 4e-40 Identities = 374/553 (68%), Gaps = 13/553 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 ||||| ||||||||||| | || ||||| || || | ||| || ||| || | Sbjct 2540507 CACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAGC 2540566 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | ||||| || ||||||||||| |||||||| || || || || || || Sbjct 2540567 CCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAAG 2540626 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 || |||||||| || || || || || | || || |||| | | || | || | Sbjct 2540627 ATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAA---TACCGACGTCTTGTCG 2540683 Query 93272 ---ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTA--GTGTTTCGATAG 93326 ||||| | ||||| |||||||| ||||| || ||||| | | | || || | Sbjct 2540684 GATATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATGCAAGGAATGGAGGTT--ATGG 2540741 Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 | || | |||| ||| |||||||| | ||| |||||||| ||||| | || || | Sbjct 2540742 CATTGAGGAGGTGATCACGCTCGTCAGGGTCTTTGATGTATGTGTCGATGAGTAGCGAGT 2540801 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 | | || || |||| ||||| || || ||||| |||||||| ||||| || || | Sbjct 2540802 AGGTCTCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCGTAGAAGCATCTTGCCTCAG 2540861 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 || || || | ||| || | ||| ||||||||||| || ||||| || ||||| | Sbjct 2540862 CAGCTTGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCGTTCACTATGCCGTCGGAGG 2540921 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCAT---CATCTTTAAGCTTAT 93563 | || || ||||| || | || | || || | ||| | ||| | | | | Sbjct 2540922 CGGCGAAGAAAGCTAAGACATTCGAGATGAAGTACCGCTCGTTGGCATTGAGACGGTCGT 2540981 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| || | ||||| | || || |||| ||||| || ||||| || |||||||||| Sbjct 2540982 TCCAGTCTGTGAGATCATGGGATAGGTCGATCTCTTCTACTGTCCAGAAAGATGCTTCTG 2541041 Query 93624 CTTTTTTGTACAT 93636 ||||||||||||| Sbjct 2541042 CTTTTTTGTACAT 2541054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859915983480