Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq25 105 6e-18 >seq1 Length=3640883 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || ||| | || |||||||| || | || Sbjct 1684085 ATGCAGATCTTTGTCAAGACCCTTACGGGGAAGACGATTACGCTTGAAGTCGAGTCATCC 1684144 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||| ||||| || ||||||||||| || ||||| || Sbjct 1684145 GACACAATCGACAACGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 1684204 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | ||||| ||||||| ||||||| |||||| Sbjct 1684205 CAGCGCCTCATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 1684264 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || ||| | ||| | ||| | || |||| || ||| Sbjct 1684265 ATTCAGAAGGAGTCTACCCTTCATCTCGTTCTTCGTCTGCGTGGCGGT 1684312 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || || |||||| ||||||| || || || | || Sbjct 1684875 ATGCAAATCTTTGTGAAGACCTTGACAGGGAAAACGATCACTCTCGAGGTCGAGTCTTCC 1684934 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || || |||||| Sbjct 1684935 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAA 1684994 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||||||| | ||||| || || | || ||||| || Sbjct 1684995 CAGCGCCTGATCTTCGCCGGCAAACAGCTCGAGGACGGTCGTACTCTTTCTGATTATAAT 1685054 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || || | ||| | ||| | || |||| || || Sbjct 1685055 ATTCAGAAGGAGTCTACTCTTCATCTCGTTCTTCGTCTGCGTGGTGG 1685101 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||| || || || ||| |||| || || ||||| || | Sbjct 1684313 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACGATCACGCTGGAGGTGGAGTCCTCT 1684372 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | ||||| || || ||||| |||||||| ||||| || ||||| Sbjct 1684373 GACACAATTGATAACGTCAAAGCCAAGATCCAAGATAAGGAGGGCATTCCCCCTGATCAG 1684432 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || || || || ||||| || ||| || || | || ||||||||| Sbjct 1684433 CAACGTCTCATCTTCGCTGGGAAGCAGTTGGAAGATGGTCGGACGTTGTCGGATTACAAC 1684492 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 1684493 ATTCAGAAGGAGTCGAC 1684509 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||||| || || || || |||||||||| || ||| | | Sbjct 1684594 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACTCTTGAGGTCGAATCTTCT 1684653 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||| || || ||||||||||||||||| || || || Sbjct 1684654 GACACAATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 1684713 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || || | |||||| || || | || ||||||||| Sbjct 1684714 CAGCGCCTGATTTTCGCTGGAAAGCAACTCGAGGATGGTCGTACACTTTCTGATTACAAC 1684773 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 1684774 ATCCAGAAGGAGTCTAC 1684790 >seq25 Length=839721 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || || ||||||| || || || || || Sbjct 327359 ATGCAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACTCTCGAGGTCGAGTCCTCC 327300 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || ||||| |||||||||||||| || || ||||| Sbjct 327299 GACACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 327240 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||||| ||||| || || | || || |||||| Sbjct 327239 CAGCGCCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACTCTTTCTGACTACAAC 327180 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 327179 ATTCAGAAGGA 327169 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| | |||||||| || || | | Sbjct 327076 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTCG 327017 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || ||||| ||||||||||| || || || || ||| Sbjct 327016 GACACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAA 326957 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| || || |||||| ||||| |||| ||||||||| Sbjct 326956 CAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTACAAC 326897 Query 22399 ATTCAAAAAGAA 22410 ||||| || ||| Sbjct 326896 ATTCAGAAGGAA 326885 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || || || ||||| ||| |||| || || || || | | Sbjct 326792 ATGCAGATTTTCGTTAAGACGTTGACTGGTAAGACGATCACCCTCGAGGTTGAGTCGTCG 326733 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| || |||||||| ||||| || || || Sbjct 326732 GACACCATCGACAACGTCAAGGCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAG 326673 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | ||||| || || | ||||| ||||| Sbjct 326672 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTTTCCGACTACAAT 326613 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || || ||| | || | || ||||| | ||||| || || Sbjct 326612 ATCCAGAAGGAGAGCACGCTTCACCTGGTCTTGCGTCTCCGCGGTGGGTT 326563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727350339755