Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 109 1e-18 seq3 91.5 3e-13 seq1 84.2 4e-11 >seq4 Length=2243620 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 279704 TCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGA 279763 |||||| |||||||||||||||||||| || | | || || || || | || || Sbjct 1858344 TCTGTCTGGTGGTTGGAAGATGAAGCTTGCATTGGCCCGTGCGATGCTTTTCAAGGCTGA 1858403 Query 279764 TGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGT 279823 | |||| ||||| |||||||| || |||||| ||||| |||||| || ||| | | Sbjct 1858404 TATCCTCCTGCTCGATGAGCCCACTAACCACTTGGACGTTGTCAACGTCGCATGGTTGGA 1858463 Query 279824 GTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTT 279883 | |||||| || | ||||||| ||||| ||||||| |||||||| || ||||| Sbjct 1858464 GAACTACCTCACGGGCCTGAAGACCTGCACTTCCATCATTGTTTCTCACGATTCCGGCTT 1858523 Query 279884 CCT 279886 ||| Sbjct 1858524 CCT 1858526 >seq3 Length=2745113 Score = 91.5 bits (100), Expect = 3e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 251545 TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATG 251604 || || || ||||| |||||||| || | |||||| | ||| || || || |||||| Sbjct 2540165 TAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCTTGCAGCGATATGAGGTCCATG 2540224 Query 251605 AAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGG 251664 |||||||||||||| | | ||||| ||||| || | || || | || | || |||| Sbjct 2540225 AAGTCGAAGGGGTTCGACGAGTTGTAGTGCTTCGGGTTCCCGAGCGAGACCAGGAGGCGG 2540284 Query 251665 TCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || || ||||| | ||||| | ||| || | ||||||||| || Sbjct 2540285 TCGGCGACGAACTCGATGTACTGACACATGAGCGAGGCGTTCATGCCGAT 2540334 >seq1 Length=3640883 Score = 84.2 bits (92), Expect = 4e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716 |||| ||||| | |||||||||||| | | |||| | ||||||||||| ||||||| Sbjct 411172 AGGTTGCTCAACTGGTTGGTTATGTATCTGGACTTTCGGCGTACCATCACGGAGAGCAGA 411113 Query 218717 GTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACT 218776 || || || | || | | | || || |||| ||| || || || |||||||| Sbjct 411112 GTTTGATGGCAACAATCATCAACTTAGCGCAAGACTTTGTTGGAAGCAATAACATGAATC 411053 Query 218777 TGCTGCTCCCCAACGGTCAGTTTGGT--TCTCGTCTATTGGGTGGAAAGGATAGTGCTTC 218834 | || | || || ||||| || ||| || || | | |||||| || || |||||| Sbjct 411052 TCCTCATGCCGAATGGTCAATTCGGTAGTCGCGACCA--GGGTGGTAAAGACCATGCTTC 410995 Query 218835 TGCCAGGTATATCT 218848 ||| ||||| |||| Sbjct 410994 TGCTAGGTACATCT 410981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835127516807