Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq25 104 2e-17 seq6 87.8 2e-12 >seq1 Length=3640883 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 ||||| |||||||| |||||| | ||||| || || | || || |||||| || Sbjct 1685293 TCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCAACTGCTTTCCAGCGAAG 1685234 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||||||||| || ||||||||||||||||| ||||| |||||| || | | Sbjct 1685233 ATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACGTTG 1685174 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| || || | || ||||| |||| ||| | || || || ||||| || || ||| Sbjct 1685173 TCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCCCCGTCAGCGTCTTCACA 1685114 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 1685113 AAGATCTGCAT 1685103 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || |||||||||||||| || || ||| |||||| | || || ||| Sbjct 1684509 GTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAACTGCTTCCCA 1684450 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||||||||| || || || || |||||||| || || || ||||| ||| Sbjct 1684449 GCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATCTTGGCTTTG 1684390 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | ||| || || |||| || | ||| || || |||| ||| Sbjct 1684389 ACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCCGTCAAAGTC 1684330 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 1684329 TTGACGAAAATCTGCAT 1684313 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || ||||||||||| | |||||| ||| || ||||| || ||| Sbjct 1684790 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCTCGAGTTGCTTTCCA 1684731 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || || ||||| ||||| |||||||| || || ||||| |||||| || Sbjct 1684730 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTC 1684671 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | |||||||| || | || | || ||||| |||| ||| Sbjct 1684670 ACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTGCCAGTCAAAGTC 1684611 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||| ||||| Sbjct 1684610 TTCACAAAAATTTGCAT 1684594 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | ||| | ||| | ||||| || || ||||||||||| ||| Sbjct 1684314 ATACCGCCACGCAGACGAAGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCG 1684255 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || ||||| ||||||| ||||| ||||| ||| Sbjct 1684254 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGA 1684195 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || ||||||| || | | || | ||||||| || ||| Sbjct 1684194 GGGATACCCTCCTTATCCTGAATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTCG 1684135 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| || || || || || || ||||| |||||||| Sbjct 1684134 ACTTCAAGCGTAATCGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 >seq25 Length=839721 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250 ||| || |||||||||||||| | || ||| ||| || | ||| || ||||| | Sbjct 326885 TTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGCTTGCCAGCAAA 326944 Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310 |||||||||||||||||| ||||| ||||| || ||||| |||||| || | | Sbjct 326945 GATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTT 327004 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || | |||||| | || || || || | || | ||| ||||| ||||| || || || Sbjct 327005 ATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTCTTGAC 327064 Query 114371 AAAAATCTGCAT 114382 || |||||||| Sbjct 327065 GAAGATCTGCAT 327076 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||| || || || || || ||| |||| || ||||| ||||| |||||||||||||| || Sbjct 327482 ATCCTCGAGCTGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTT 327541 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || |||||| || | | || | |||||||| ||| || || || | ||| | Sbjct 327542 ATCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGAT 327601 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || || |||| || || ||||| ||||||||| Sbjct 327602 AGTCTTCCCCGTCAACGTCTTGACAAAGATCTGCATG 327638 >seq6 Length=2010026 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || | ||| | || || || || || |||||||||||||| Sbjct 1330032 ACCACCACGGAGACGAAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGCT 1330091 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| ||| ||| || || || || |||||| ||||||| ||||||||||| ||||| Sbjct 1330092 CAAAGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGG 1330151 Query 114275 AAT 114277 || Sbjct 1330152 GAT 1330154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133749710724