Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 273 4e-68 seq11 109 1e-18 >seq3 Length=2745113 Score = 273 bits (302), Expect = 4e-68 Identities = 614/915 (67%), Gaps = 92/915 (10%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 || ||| |||||||||||||||| | ||| |||||| || |||||||| || || Sbjct 2542364 ATTTGGAACATGTACAAGAAGGCGGAAGCTTCCTTCTGGACTGCAGAGGAGATGGATCTC 2542423 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACT-GTCTGAGAAC-GAAAAG---TTTTTCCTCA 42414 ||||||| | | || |||| | || | |||| | | || || |||||| || Sbjct 2542424 TCCAAGGATATGCACGACTGGAA--CAATCGTCTCAATGCCGACGAGCGCTTTTTCATCT 2542481 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 | | || || || || ||||| || ||||| || |||||||||||||| | | Sbjct 2542482 CCCATGTCCTCGCGTTTTTTGCCGCGTCGGACGGTATCGTCAATGAGAACCTTGTCGAGC 2542541 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | ||| || ||||| ||| | |||||| ||||||||||||||||||||||| | Sbjct 2542542 GTTTCTCCAACGAGGTTCAGGCCGCTGAGGCACGCTGCTTCTACGGCTTCCAGATTATGA 2542601 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCG 42594 | |||||| | ||||| ||| ||| | || || |||| || ||| ||| |||| Sbjct 2542602 TGGAGAACATCCACTCCGAGACCTACTCGCTGTTGATCGACACCTATATCAAGGACCCCG 2542661 Query 42595 TCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654 |||| | |||||| | ||||| ||||| || || ||||||||||||||||| | Sbjct 2542662 AGCAGCGCGAACACCTGTTCGACGCCATCGAGACTATCCCTTGCATCAAGAAGAAGGCAG 2542721 Query 42655 ACTGGGCGCTCAACTGGAT------CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGG 42708 ||||||| | |||||| | |||| | | | |||| ||| | || | Sbjct 2542722 ACTGGGCTTTGCGCTGGATATCTGACAAGAG------CTCTTCTTTCGCTGAGCGTCTTG 2542775 Query 42709 TAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGC 42768 | || || ||||||| ||||| ||||| ||||| ||| | ||||| || || ||||||| Sbjct 2542776 TGGCTTTCGCCGCCGTAGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTCTGGC 2542835 Query 42769 TCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGAC 42827 ||||| || || || ||||| || ||||| ||||||||||| ||||||||| | ||| Sbjct 2542836 TCAAGAAGCGTGGACTC-ATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGAC 2542894 Query 42828 GAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCC 42887 ||||| |||| | ||||| || || || || ||| ||||| | | || | || Sbjct 2542895 GAGGGTATGCACACCGACTTCGCATGTCTGCTTTTC---AGCCATTTGAAGC-GGCGTCC 2542950 Query 42888 TCGAAGGAGCG-GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCC- 42945 || | || |||| |||||||| ||||| || | ||||||| ||||||||| Sbjct 2542951 TCATCCCAACGTCATCCGCAAGATCATCACTGAGGCTGTTGCGATCGAGCAGGAGTTCCT 2543010 Query 42946 ----------------------------TCACGCA------GTCGC--TGCCCG----TG 42965 ||||||| ||| |||||| || Sbjct 2543011 TAGTGGTTCGTCTCTTGTTATGTCATTGTCACGCACCTTTTAACGCTGTGCCCGCAGATG 2543070 Query 42966 ----TCC-------CTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTAC 43013 ||| || | |||||||| | |||| ||||||||| |||||||| ||| | Sbjct 2543071 CACTTCCATGCGGACTCATTGGCATGAA-CGCGACGCTCATGTGCCAGTACATCGAGTTC 2543129 Query 43014 GTCGCCGACCATCTCCTG--TGCCAGATGGGT----CTCAGCCGCCTCTACAACACGCCG 43067 || ||||| | ||| || |||| | ||| || || |||||||| || || Sbjct 2543130 GTTGCCGATCGTCTGGTGGTTGCC--CTCGGTAACCCTAAG----ATCTACAACGCGACG 2543183 Query 43068 TGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAG 43127 ||| |||||||||||||| | |||||| || | |||||||| ||||| ||||||||| Sbjct 2543184 AACCCTTTCGACTTTATGGATATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAG 2543243 Query 43128 CGCGTCGCCGACTAC 43142 |||||| | |||||| Sbjct 2543244 CGCGTCTCAGACTAC 2543258 Score = 244 bits (270), Expect = 2e-59 Identities = 525/782 (67%), Gaps = 76/782 (10%) Strand=Plus/Minus Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 || |||||||||||||| ||||||||||| || || || || | | | ||| || Sbjct 2540934 GCTTTCTTCGCCGCCTCCGACGGCATAGTGAACGAAAATCTCGTCGAGCGCTTCTCTAAC 2540875 Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545 ||||| || |||||| | ||||||||||||||||||||| ||||||||| | Sbjct 2540874 GAGGTTCAAGCTGCTGAGGCAAGATGCTTCTACGGCTTCCAGATAATGATAGAGAACATC 2540815 Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605 ||||| ||| ||| | ||| || |||| |||||| || || | ||||||| | Sbjct 2540814 CACTCCGAGACCTACTCGCTACTCATCGACACATACATCAAAGACCCTGACGAGCGTGAT 2540755 Query 42606 GGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTC 42665 || |||| ||||| | || || |||||||||||||| || ||||||||||| Sbjct 2540754 CACCTCCTCAATGCCATAACCTCCATTCCTTGCATCAAGAAGAAAGCCGACTGGGCGCTG 2540695 Query 42666 AACTGGAT---CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 |||||| ||| | | | || | || || ||| |||| || || || |||| Sbjct 2540694 CGCTGGATATCCGACAAGAC-GTCGGTA--TTTGGGGAGCGGCTCGTTGCTTTCGCCGCT 2540638 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGT 42781 || || |||||||||||||| || ||||||| || || |||||||||||| || || Sbjct 2540637 GTGGAAGGCATCTTCTTCTCCGGATCCTTCGCGTCAATATTCTGGCTCAAGAAGCGCGGA 2540578 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 || |||||||| || || ||||| ||||| ||||||||| | |||||||| |||||| Sbjct 2540577 CTC-ATGCCCGGGCTGACGTTCTCTAACGAGCTCATCAGCCGCGACGAGGGCATGCATAC 2540519 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT---CAGGCACAAGCCCTCGAAGGAGCG 42898 ||||| || || |||||| ||| | |||||| |||| || | | || | | Sbjct 2540518 CGACTTCGCGTGTCTCCTG--CTCCA-CCACCTGAAGAGGCGGCCGCACCCCAA-CACC- 2540464 Query 42899 GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCC--TCACGCAGTCG 42956 ||| ||||||||||||||||| ||||||| | ||||||| ||| | | ||| Sbjct 2540463 -ATCCTCAAAATCATCACGGAGGCCGTCACGATCGAGCAAGAGTTCCTGTCAGGTAATCG 2540405 Query 42957 ---CTGC----------------------------------------CCGTGTCCCTG-- 42971 |||| | ||| ||||| Sbjct 2540404 CCTCTGCTCTCCCATACCAGTTCCCTCGTGATTCCTAATGACGTTTGCAGTGGCCCTGCC 2540345 Query 42972 -GT---------CGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 || |||||||||| | |||||||| |||||||| ||| ||||||||| Sbjct 2540344 CGTCTCGCTCATCGGCATGAACGCCTCGCTCATGTGTCAGTACATCGAGTTCGTCGCCGA 2540285 Query 43022 CCATCTCCTGTGCCAGAT-GGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACT 43080 || |||||| | | | ||| | | | | ||||||| || || ||||||||||| Sbjct 2540284 CCGCCTCCTGGTCTCGCTCGGGAACCCGAAG-CACTACAACTCGTCGAACCCCTTCGACT 2540226 Query 43081 TTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACT 43140 | ||||| ||| ||| || | |||||||||||||| ||||||||||| || | |||| Sbjct 2540225 TCATGGACCTCATATCGCTGCAAGGCAAGACCAACTTCTTCGAGAAGCGTGTTTCGGACT 2540166 Query 43141 AC 43142 || Sbjct 2540165 AC 2540164 >seq11 Length=1765784 Score = 109 bits (120), Expect = 1e-18 Identities = 133/181 (73%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 |||| |||||| | || || | || || || || || ||||||||||||| ||||| Sbjct 1056820 GCCATGGTTCTTACGAAGGTCGAGGAATTCGAAAACATCAGCGTGCCAGGGCTCAATGTA 1056761 Query 245131 GACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAG----CG 245186 || |||| |||||||||||||||||||||||||| || | | | ||||| || Sbjct 1056760 GATCGCGAATGCGCCGGGCCGCTTGTTGCCTCCCTGATCTA----CATATCGAGCAGTCG 1056705 Query 245187 CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGT 245246 ||| | || ||| || | || || |||||||| |||| ||||||||| || ||||| Sbjct 1056704 CGTCGTAGGCGCGAAGCATCGGGACGATGCCGTTGGAGTAGCCGTTGGTTCCAGCGATGT 1056645 Query 245247 A 245247 | Sbjct 1056644 A 1056644 Score = 109 bits (120), Expect = 1e-18 Identities = 201/293 (69%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 244298 CCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG--GGGCTGCCCTCGTAGGTCGGGT 244355 ||||||| || |||| || | || || ||||| || || |||||||| ||| || Sbjct 1057685 CCCCACAGATCGTACTGTAGTTGTCCTTT--TGACGCAGGACTACCCTCGTACGTCTCGT 1057628 Query 244356 AGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCT 244415 | || ||||| | |||| | || ||| | || | ||||||| ||||||||||| Sbjct 1057627 ACGGCCCGTCTGTTTCAGCCATATCACTACTCGCCTCAACCGCGGCGTGGTAGATGGTCT 1057568 Query 244416 CGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCA 244475 |||||||| | ||| | ||| |||| | || ||| || || | | | || Sbjct 1057567 CGAAGATCTGTTGGTTGAGCCGGCGCGCCTCGGGCGAGTCGAAAGGCATACGGAGCGCCA 1057508 Query 244476 TGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGC 244535 |||| ||| || || ||||||||||| | || || || | ||| ||||||||||| | Sbjct 1057507 TGAACGTGTCAGCGAGACCCTGCACGCCAACACCAATCGGGCGGTGACGCTTGTTGGACC 1057448 Query 244536 GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTG 244588 || |||||| || | ||||| ||||| | ||||| | | ||| |||||| Sbjct 1057447 GCTCGGCTTCAGGAATTGGGTAGTAGTTGGCATCGATGATCCGGTTAAGGTTG 1057395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337700861520