Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq25 143 6e-29 seq1 141 2e-28 seq3 87.8 4e-12 >seq25 Length=839721 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | | || || |||| |||||| || || |||||||| ||||||| Sbjct 326566 CCACCGCGGAGACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAA 326625 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || ||||| || | || || || || |||||||| ||||| || || Sbjct 326626 AGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 326685 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||| || ||||| || ||||| || || | || ||| || || Sbjct 326686 ATGCCCTCCTTATCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACC 326745 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||||||||| || |||| ||||| ||||| |||||||| Sbjct 326746 TCGAGGGTGATCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 |||||||| || || || || || || | ||||||||| || || || ||||| || || Sbjct 326880 GTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGCTTGCCA 326939 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || ||||| ||||||||||| | ||||| || || || ||||| || ||||| ||| Sbjct 326940 GCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 326999 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 ||||| || || | || ||| || || || || || |||||||| || ||||| ||| Sbjct 327000 ACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTC 327059 Query 288457 TTGACGAATATCTGCATT 288474 |||||||| ||||||||| Sbjct 327060 TTGACGAAGATCTGCATT 327077 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||| | || || || || || || || ||||| | || || || ||||| || | Sbjct 327152 CGAGATGGAGGGTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCA 327211 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 | || ||||| ||||| ||||| ||||| ||| | ||||| || || || ||||| | Sbjct 327212 ACTGCTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAA 327271 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | ||||| ||||| || || || | ||| || || || ||||| ||||| ||||||| Sbjct 327272 TCTTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCC 327331 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||| |||||||| || |||||||| Sbjct 327332 CGGTCAACGTCTTGACAAAGATCTGCAT 327359 >seq1 Length=3640883 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| |||||||||| || || || || |||||||| || | Sbjct 1685102 TCCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGA 1685043 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || ||||| || | ||||| || ||||||||||| ||||||||| | || Sbjct 1685042 AAGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGG 1684983 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || |||||||| ||||| || ||||| || || | ||| || || || Sbjct 1684982 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGAC 1684923 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||||||| ||||| |||| ||||| || || || ||||| Sbjct 1684922 CTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| |||||||||| || || || || || || ||||||| | Sbjct 1684311 CCGCCACGCAGACGAAGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAG 1684252 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| || ||||| || ||| Sbjct 1684251 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGG 1684192 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||| || || || |||||||| || || | ||| || || ||| Sbjct 1684191 ATACCCTCCTTATCCTGAATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTCGACT 1684132 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| || || |||||||| || |||||||| Sbjct 1684131 TCAAGCGTAATCGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 118 bits (130), Expect = 3e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||||| || || || || || || || || | | ||| || || ||||| | Sbjct 1684520 CGAGATGAAGTGTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCA 1684461 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 | || || || |||||||| ||||| || ||| | || || || || ||||| |||| Sbjct 1684460 ACTGCTTCCCAGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGA 1684401 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || ||||| ||||| || || | || || || || || |||||||||||||| | Sbjct 1684400 TCTTGGCTTTGACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTC 1684341 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | |||| |||||||||||| |||||||| Sbjct 1684340 CCGTCAAAGTCTTGACGAAAATCTGCAT 1684313 >seq3 Length=2745113 Score = 87.8 bits (96), Expect = 4e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| ||| |||||| ||| || ||||| ||||| || || || || | Sbjct 2540334 ATCGGCATGAACGCCTCGCTCATGTGTCAGTACATCGAGTTCGTCGCCGACCGCCTCCTG 2540275 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 | ||||| | ||| ||||| ||| ||| ||||||| ||| ||||| || Sbjct 2540274 GTCTCGCTCGGGAACCCGAAGCACTACAACTCGTCGAACCCCTTCGACTTCATGGACCTC 2540215 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGT 269312 || ||||| |||| ||||| ||||||||||| |||||||| Sbjct 2540214 ATATCGCTGCAAGGCAAGACCAACTTCTTCGAGAAGCGTGT 2540174 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 || || ||||| || |||||| || || ||||| ||||| || |||||| | | Sbjct 2543088 ATTGGCATGAACGCGACGCTCATGTGCCAGTACATCGAGTTCGTTGCCGATCGTCTGGTG 2543147 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 || |||||| | || | ||||| ||| ||| || |||| ||||||||| | Sbjct 2543148 GTTGCCCTCGGTAACCCTAAGATCTACAACGCGACGAACCCTTTCGACTTTATGGATATG 2543207 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 || ||||| |||| ||||||||||||||||| ||||| ||| ||||| Sbjct 2543208 ATCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGTCTCAGACTA 2543257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652480481106