Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 seq1 96.9 4e-15 >seq3 Length=2745113 Score = 111 bits (122), Expect = 2e-19 Identities = 167/235 (71%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| | ||||||||||||| |||||| || |||||||| || || |||||||| || Sbjct 2542906 GTGCATACCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCAGGCATGAGTCC 2542847 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| |||| || || || ||||| ||||| ||||| || Sbjct 2542846 ACGCTTCTTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAAAAAGATACCCTCTACGGC 2542787 Query 126178 CGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCA---AACCACTTCA 126233 ||||| || | ||||||||||| |||| || || | ||||| | ||| || Sbjct 2542786 GGCGAAAGCCACAAGACGCTCAGCGAAAGAAGAGC----TCTTGTCAGATATCCAGCGCA 2542731 Query 126234 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 ||||| | ||||| |||| ||| || |||| |||| ||| || || || || Sbjct 2542730 AAGCCCAGTCTGCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGCGTCGAACAG 2542676 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| ||| |||||| || || ||||| ||| || |||||||| || |||||| Sbjct 2540528 CCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAGCCCGGGCATGAGTCCGCGCTTC 2540587 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || || || ||||||||||| || |||||| ||||| Sbjct 2540588 TTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAAGATGCCTTCCACAGCGGCGAAA 2540647 Query 126185 GCAAAGAGACGCTCAGCAAA 126204 |||| ||| ||||| |||| Sbjct 2540648 GCAACGAGCCGCTCCCCAAA 2540667 >seq1 Length=3640883 Score = 96.9 bits (106), Expect = 4e-15 Identities = 85/105 (81%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 172798 CTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAAC 172857 ||| |||||||||||||| || ||||||| ||||||||||| ||| ||||| || || Sbjct 412166 CTTTCCACGGAGAGGGAAGACGCCGTAGTTGTCACGACCAACAACACCCAGACCTGCGAC 412225 Query 172858 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACA 172902 || || || || |||||||| ||||| || | |||||||||||| Sbjct 412226 CGCTAGCGTTTTGGCGGAATC-CCCTCGGTAAGGATGAGCGTACA 412269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352651701160