Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 seq25 86.0 6e-12 >seq1 Length=3640883 Score = 114 bits (126), Expect = 1e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | ||| || ||||||| || || || || ||||||||||| || | Sbjct 1684312 ACCGCCACGCAGACGAAGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGA 1684253 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||| || ||| | ||||| ||||||||||||||||| Sbjct 1684252 GAGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGG 1684193 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTAC 64368 || || || || || || || ||| ||| || Sbjct 1684192 GATACCCTCCTTATCCTGAATCTTTGCCTTCAC 1684160 Score = 105 bits (116), Expect = 7e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| ||||| || || |||||||||||||| | | || || | ||||| | | Sbjct 1684518 AGATGAAGTGTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAAC 1684459 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| || || | ||||| || ||||| || || ||||| || || || ||||| | | Sbjct 1684458 TGCTTCCCAGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGA-T 1684400 Query 64358 TTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCC 64416 || ||||| || || | ||| ||| || ||||| || | || | ||||| || Sbjct 1684399 CTTGGCTTTGACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCC 1684340 Query 64417 GGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| || |||||||| ||||| Sbjct 1684339 CGTCAAAGTCTTGACGAAAATCTGCAT 1684313 Score = 105 bits (116), Expect = 7e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| || || || || || ||||||||||| | | || || | || || || Sbjct 1684799 AGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCTCGAGT 1684740 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| || || |||| || ||||||||||| |||||||| || || || || || || Sbjct 1684739 TGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATC 1684680 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 ||| ||| || || | ||| ||| | || || || | ||| | |||||||| Sbjct 1684679 TTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTGCCA 1684620 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| || || ||||||||||| Sbjct 1684619 GTCAAAGTCTTCACAAAAATTTGCAT 1684594 >seq25 Length=839721 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/195 (70%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || |||||||||||||| | || ||||| | || || | |||||||| ||| | Sbjct 326885 TTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGCTTGCCAGCAAA 326944 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 ||||| ||||| ||||| ||||| || || || || || || || || ||| || Sbjct 326945 GATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTT 327004 Query 64372 CTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTT 64429 || | || | ||| || || || || | ||| | |||||||| |||| || || Sbjct 327005 ATCGATGGTGT--CCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTCTTG 327062 Query 64430 ACGAAAATTTGCATT 64444 ||||| || |||||| Sbjct 327063 ACGAAGATCTGCATT 327077 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || || ||||| || | | ||||| | || || ||||||||||| || | Sbjct 327447 TCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAG 327506 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || |||||||||||||||||||| ||||| || || || || || ||| ||| Sbjct 327507 ATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTG 327566 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || || ||||| || | || | ||||| || ||||| || || || Sbjct 327567 TCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTGACA 327626 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 327627 AAGATCTGCAT 327637 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || || |||| ||| || || || || ||||| || | | || || |||| || Sbjct 326584 ACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGACCGTCCTCC 326643 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||||||||||||| | || || ||||||||||| |||||||| || || || || || Sbjct 326644 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGA 326703 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCT 64412 || || ||| || || | || | ||| || || || || | || | |||| Sbjct 326704 ATCTTCGCCTTGACGTTGTCGATGGTGT--CCGACGACTCAACCTCGAGGGTGATCGTCT 326761 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || ||||| || || |||||||| ||||| Sbjct 326762 TACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644006813880