Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq11 93.3 4e-14 >seq11 Length=1765784 Score = 93.3 bits (102), Expect = 4e-14 Identities = 94/121 (78%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 94518 CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTG 94577 |||| || | |||||||||||||||||| | ||||| |||||| ||| ||||| || Sbjct 1057201 CTCTTTCCA-GCCAAGTCCAACCAGCAGAATCTCGGCACTATCAAGTCCTCCAATCTTTG 1057259 Query 94578 CACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 ||| ||||| ||||||| | || || || |||| |||||| || ||||| | |||||| Sbjct 1057260 CACAGAGATCATCGAGTACTCCTCACCAGATGAGACTGCTGTCTGCAACCTCGCCTCCAT 1057319 Query 94638 C 94638 | Sbjct 1057320 C 1057320 Score = 89.7 bits (98), Expect = 5e-13 Identities = 164/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 || |||||| || ||||| ||| |||||||||| ||||||| ||||| || | || Sbjct 1056641 TCTTACATCGCTGGAACCAACGGCTACTCCAACGGCATCGTCCCGATGCTTCGCGCCT-- 1056698 Query 94129 AACAACGCG---GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCG 94185 || ||||| || || || || || ||||| || | | || || | |||||| Sbjct 1056699 -ACGACGCGACTGCTCGATATGTAGATCAGGGAGGCAACAAGCGGCCCGGCGCATTCGCG 1056757 Query 94186 GTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC 94245 |||| | |||||||||||||| || || | ||| ||||||| || |||||||| Sbjct 1056758 ATCTACATTGAGCCCTGGCACGCTGATGTTTTCGAATTCCTCGACCTTCGTAAGAACCAT 1056817 Query 94246 GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 ||||| || | | || | || || || || ||||| ||| | || ||||| || Sbjct 1056818 GGCAAAGAGGAAGTCCGCGCTCGGGATCTGTTTTATGCTCTTTGGATTCCGGACCTATT 1056876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722414626920