Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq25 113 4e-20 seq3 111 2e-19 >seq1 Length=3640883 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| ||| | ||| | ||| | | | |||||||| ||||||||||||||| Sbjct 1684311 CCGCCACGCAGACGAAGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAG 1684252 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || || | | |||| || ||||| ||||| ||||| Sbjct 1684251 AGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGG 1684192 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || || || ||| | |||| || | ||| || | ||||||| ||||| | Sbjct 1684191 ATACCCTCCTTATC-CTGAATCTTTGCCTTCACGTTG-TCGATTGTGTCGGATGACTCGA 1684134 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | ||| | ||| || || || || || || ||||| |||||||| Sbjct 1684133 CTTCAAGCGTAATCGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| || | ||||| ||||||||||| || || | Sbjct 1684787 GACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCTCGAGTTGCTTTCCAGCG 1684728 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || ||||| ||||| ||||| ||||| || ||||| ||| ||| || | Sbjct 1684727 AAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCACG 1684668 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | || || ||||| | || | || || ||||||| ||| || Sbjct 1684667 TTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTGCCAGTCAAAGTCTTC 1684608 Query 138601 ACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 1684607 ACAAAAATTTGCAT 1684594 >seq25 Length=839721 Score = 113 bits (124), Expect = 4e-20 Identities = 144/195 (74%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || || ||||||||| | ||||| |||||| || || || |||| | | Sbjct 326601 CTCCTTCTGGATATTGTAGTCGGAAAGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAA 326660 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| || ||||| ||||||||||| || || || || || ||| | || | || | | Sbjct 326661 GATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATC-CTGAATCTTCGCCTTGACGT 326719 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | |||||| ||||||| || | ||| |||||||||| || || Sbjct 326720 TG-TCGATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTTACCAGTCAACGTCTTA 326778 Query 138601 ACAAAAATCTGCATG 138615 || |||||||||||| Sbjct 326779 ACGAAAATCTGCATG 326793 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || || |||||||| | ||| || |||||||| || || || | | Sbjct 327446 CTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 327505 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 |||||| ||||| ||||| ||||| || ||||| || || ||| | || | || | | Sbjct 327506 GATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCC-TGAATCTTCGCCTTGACAT 327564 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 ||| | | |||||||| ||||||||||| | || | || || || |||| || || Sbjct 327565 TGT-CGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTG 327623 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 327624 ACAAAGATCTGCATG 327638 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| ||||||||||| || | || || ||||| | ||| || || | | || Sbjct 326886 TCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGCTTGCCAGCAAAG 326945 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTG 138542 || |||||||||||||| ||||| || || || ||||| ||| | || | || | | Sbjct 326946 ATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTC-CTGAATCTTCGCCTTCACGTT 327004 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||| | |||||| ||||| | || | ||| || || ||||| || || || Sbjct 327005 ATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTCTTGAC 327064 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 327065 GAAGATCTGCAT 327076 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| | |||||| |||||| | || || || | | Sbjct 327168 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCAGCGAA 327227 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 || || ||||| || || || || ||||| || ||||| ||| | || | || || Sbjct 327228 AATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTC-CTGAATCTTCGCCTTCACAT 327286 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||||| ||||| ||||||| || | || || || |||| || || Sbjct 327287 TG-TCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAACGTCTTG 327345 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 327346 ACAAAGATCTGCAT 327359 >seq3 Length=2745113 Score = 111 bits (122), Expect = 2e-19 Identities = 134/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTT 52709 || ||||| ||| ||| | ||||||||||| | |||||| ||||||||||||| Sbjct 2540352 GCCCTGCCCGTCTCGCTCATCGGCATGAACGCCTCGCTCATGTGTCAGTACATCGAGTTC 2540293 Query 52710 GTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC-TCGCAATCC 52768 || || || || || |||| ||||||| | || ||| ||| |||| | ||| || || Sbjct 2540292 GTCGCCGACCGCCTCCTGGTCTCGCTCGGGAACCCGAAGCACTACAACTCGTCG-AACCC 2540234 Query 52769 GTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 || || || ||| || ||| ||||| | |||||||||||||| ||||||||||| || Sbjct 2540233 CTTCGACTTCATGGACCTCATATCGCTGCAAGGCAAGACCAACTTCTTCGAGAAGCGTGT 2540174 Score = 111 bits (122), Expect = 2e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 |||||||||||| | ||||||| ||||||||||||| || || ||||||||| |||| Sbjct 2543091 GGCATGAACGCGACGCTCATGTGCCAGTACATCGAGTTCGTTGCCGATCGTCTGGTGGTT 2543150 Query 52731 CAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 ||||| | || ||| || |||||| || || || || |||||| | | || Sbjct 2543151 GCCCTCGGTAACCCTAAGATCTACAACGCGACGAACCCTTTCGACTTTATGGATATGATC 2543210 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 ||||| | |||||||| ||||| ||||||||||| ||| Sbjct 2543211 TCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGTC 2543249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261612183440