Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 136 4e-27 seq25 127 2e-24 seq3 96.9 3e-15 >seq1 Length=3640883 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | || | ||| | |||||||| || |||||||| ||||| Sbjct 1685102 TCCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGA 1685043 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| || || |||||||| || ||| |||||| ||||| ||||| ||||| Sbjct 1685042 AAGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGG 1684983 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||||||||||||| ||| ||| ||||| |||| |||| |||||| | | ||||| Sbjct 1684982 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG-TCGATGGTGTCGGAAGACTCGA 1684924 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| || | |||||| || |||| || || ||||| || ||||| Sbjct 1684923 CCTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 111 bits (122), Expect = 1e-19 Identities = 154/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 126904 CACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGT 126962 |||||| ||| | |||||||| || || || |||||||| | || ||| ||| | Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCT 1684745 Query 126963 CTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCG 127022 | || || ||||||||| | |||| |||||||| || ||||| || |||||||||||| Sbjct 1684744 CGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 1684685 Query 127023 TGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||| || ||| | |||| |||| ||||| | | ||||| || | || | || Sbjct 1684684 GGATCTTTGCCTTCACGTTG-TCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTC 1684626 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| |||| ||| || |||||||| ||||| Sbjct 1684625 TTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 |||||| ||||| || |||||| | ||| || || || | ||| ||||||||| | Sbjct 1685294 CTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCAACTGCTTTCCAGCGAA 1685235 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | ||||||||||| ||||| ||||| ||||||||| ||| || ||| | ||| Sbjct 1685234 GATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACGTT 1685175 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | || | || |||| |||||| || | ||| | || || || ||||| || || | Sbjct 1685174 G-TCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCCCCGTCAGCGTCTTCA 1685116 Query 127101 CAAAAATCTGCAT 127113 |||| |||||||| Sbjct 1685115 CAAAGATCTGCAT 1685103 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| |||||||| || ||| ||| ||| || | ||| || ||| Sbjct 1684509 GTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAACTGCTTCCCA 1684450 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || |||||||| || || ||||||||||| || ||| || ||| Sbjct 1684449 GCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATCTTGGCTTTG 1684390 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | ||| || || | || | ||| || || |||| ||| Sbjct 1684389 ACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCCGTCAAAGTC 1684330 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 1684329 TTGACGAAAATCTGCAT 1684313 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | |||||||| || || || || || |||| || ||||||| || || Sbjct 3580735 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTATAGTCGCTCAGCGTGCGACCGTCCTCA 3580794 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGC 127010 ||||| ||||| ||| |||||| ||||||||||||||||| |||| Sbjct 3580795 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGAGGGATGC 3580840 >seq25 Length=839721 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | ||||| |||| || | ||| ||| || || |||||||| ||| Sbjct 326566 CCACCGCGGAGACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAA 326625 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| ||| || || ||||| || || || |||||| |||||||| || ||||| Sbjct 326626 AGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 326685 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||| ||| || ||| ||||| |||| |||| |||||||| ||| || Sbjct 326686 ATGCCCTCCTTATCCTGAATCTTCGCCTTGACGTTG-TCGATGGTGTCCGACGACTCAAC 326744 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| ||| | ||| || || |||| || || || |||||||||||| Sbjct 326745 CTCGAGGGTGATCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCATG 326793 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 126923 TCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAG 126982 || || ||||| |||||||| | ||||||| ||| || | || || ||||| || Sbjct 326886 TCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGCTTGCCAGCAAAG 326945 Query 126983 ATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGT 127042 || | ||||| || || ||||| ||||||||||||||| || ||| ||| | | Sbjct 326946 ATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTA 327005 Query 127043 TCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 127102 |||| |||||||| ||| || || | || | ||| ||||| ||||| || || || Sbjct 327006 TCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTCTTGACG 327065 Query 127103 AAAATCTGCAT 127113 || |||||||| Sbjct 327066 AAGATCTGCAT 327076 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| || | || ||| || || | ||| ||||||||| | Sbjct 327168 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCAGCGAA 327227 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||| ||||||||||| || || || |||||||||||| || ||| ||| | | Sbjct 327228 AATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTCACATT 327287 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| |||||| | |||||| |||| || | || || ||||||| || || || Sbjct 327288 GTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAACGTCTTGAC 327347 Query 127102 AAAAATCTGCAT 127113 ||| |||||||| Sbjct 327348 AAAGATCTGCAT 327359 >seq3 Length=2745113 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 47382 TTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTAC 47441 || || | ||| ||||||| || | | || |||||||| | | ||| | ||||| Sbjct 2540361 TTTGCAGTGGCCCTGCCCGTCTCGCTCATCGGCATGAACGCCTCGCTCATGTGTCAGTAC 2540302 Query 47442 ATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACC 47501 ||||| || |||||||||||||| || || ||| | | || ||| ||| || | Sbjct 2540301 ATCGAGTTCGTCGCCGACCGCCTCCTGGTCTCGCTCGGGAACCCGAAGCACTACAACTCG 2540242 Query 47502 GAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 ||| || ||||| || ||| || ||| ||||| | |||||||||||||| |||||| Sbjct 2540241 TCGAACCCCTTCGACTTCATGGACCTCATATCGCTGCAAGGCAAGACCAACTTCTTCGAG 2540182 Query 47562 AAGCGCGT 47569 ||||| || Sbjct 2540181 AAGCGTGT 2540174 Score = 93.3 bits (102), Expect = 4e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 47412 GGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTT 47471 || ||||||||| | | ||| | |||||||||| || || ||||| || ||| | ||| Sbjct 2543091 GGCATGAACGCGACGCTCATGTGCCAGTACATCGAGTTCGTTGCCGATCGTCTGGTGGTT 2543150 Query 47472 CAGCTAAAGTATCCC-AAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACAT 47530 || ||| ||| ||||| ||| || | ||| || ||||| |||||| | | || Sbjct 2543151 GCCCTCG-GTAACCCTAAGATCTACAACGCGACGAACCCTTTCGACTTTATGGATATGAT 2543209 Query 47531 TTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 47570 ||||| | |||||||| ||||| ||||||||||||||| Sbjct 2543210 CTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGTC 2543249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500045142480