Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 seq25 98.7 9e-16 >seq1 Length=3640883 Score = 100 bits (110), Expect = 3e-16 Identities = 155/217 (71%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCA 45192 ||||| || || || ||||| ||||| || ||||| || || | || ||| || | Sbjct 1684799 AGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCA--GAAAGTGTACGACCATCCTCGA 1684742 Query 45193 ATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAA 45252 ||| ||||| ||| | |||| || |||||||| || ||||| || || || || || | Sbjct 1684741 GTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGA 1684682 Query 45253 TTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 | ||| || | || | || | ||||| ||||| ||||| || ||||| | || ||| Sbjct 1684681 TCTTTGCCTTCA-CGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTG 1684623 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 || || | ||| || |||||||||||||| ||| || Sbjct 1684622 CCAGTCAAAGTCTTCACAAAAATTTGCATACCGCCAC 1684586 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | || ||||| || || || ||||| || ||||||||||| Sbjct 1685104 ATTCCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCA 1685045 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || || | ||||| || ||| | |||| || || || || || Sbjct 1685044 GAAAGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGA 1684985 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || || || || |||| || | || | ||||||||||||||| Sbjct 1684984 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAAGACTC 1684926 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| |||||||| | |||||| || || | || || ||||| |||||||| Sbjct 1684925 GACCTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 >seq25 Length=839721 Score = 98.7 bits (108), Expect = 9e-16 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | ||| || || || ||||| ||||| |||||||| || ||| Sbjct 326566 CCACCGCGGAGACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAA 326625 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | || |||| || || || || | |||| || ||||||||||| ||| Sbjct 326626 AGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 326685 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || ||||| ||||| || |||| || | || | |||||| || ||||| || Sbjct 326686 ATGCCCTCCTTATCCTGAATCTTCGCCTTGA-CGTTGTCGATGGTGTCCGACGACTCAAC 326744 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||||| || | ||| || || || | || || || ||||| ||||| ||| || Sbjct 326745 CTCGAGGGTGATCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCATGCCGCCAC 326800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002482444920