Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq25 156 5e-33 seq1 132 5e-26 >seq25 Length=839721 Score = 156 bits (172), Expect = 5e-33 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 |||||||| || |||||||| |||||||||||||| || |||||||| | || |||||| Sbjct 327432 AGATGCAACGTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGC 327491 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 |||||||| ||||| || | |||||||||||||| || | || ||||| ||| ||| Sbjct 327492 TGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAATC 327551 Query 46508 TTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCC 46567 ||| ||||| | | | |||||| || ||||| || | ||||| || || ||| Sbjct 327552 TTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCCCC 327611 Query 46568 GTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||| || |||||||| ||||| Sbjct 327612 GTCAACGTCTTGACAAAGATCTGCAT 327637 Score = 145 bits (160), Expect = 9e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| ||||| || | || |||||||| ||||||||||||||||| || || || | Sbjct 326577 ACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGACC 326636 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||||||||| || |||| |||||||||||| | || | || |||||| Sbjct 326637 GTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTT 326696 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| |||||| ||||| ||| | | | ||||| ||| || || || | |||| Sbjct 326697 ATCCTGAATCTTCGCCTTGA-CGTTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGA 326755 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || |||| ||| ||||| || || ||||| Sbjct 326756 TCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 ||||| | ||||||||||| || || |||||||| || ||||| || |||| || | | Sbjct 327154 AGATGGAGGGTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAAC 327213 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 ||||| || ||||| |||| ||||||||| || | || | | |||||||||| ||| Sbjct 327214 TGCTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATC 327273 Query 46508 TTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCC 46567 ||| ||| | | | | |||||| || || || || | |||||||| || || Sbjct 327274 TTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCG 327333 Query 46568 GTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||| || |||||||| ||||| Sbjct 327334 GTCAACGTCTTGACAAAGATCTGCAT 327359 Score = 107 bits (118), Expect = 2e-18 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 ||||| | ||| |||||||| |||||||||||||| || |||||||| |||| ||||| Sbjct 327718 AGATGGAGTGTGCTCTCCTTCTGGATATTGTAGTCCGAGAGAGTGCGGCCGTCCTCGAGT 327777 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGG 46481 ||||| || ||||| |||| |||||||||||||| Sbjct 327778 TGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGG 327811 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || || ||||| || || ||||| || || || ||||| | || || | |||||||| Sbjct 326880 GTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGCTTGCCA 326939 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || || || | ||||| ||||| | || | || |||||||||| |||||| ||| Sbjct 326940 GCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 326999 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | ||||| ||| || || || | || || || ||||||||||| || Sbjct 327000 ACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTC 327059 Query 46577 TTAACAAAGATTTGCATT 46594 || || ||||| |||||| Sbjct 327060 TTGACGAAGATCTGCATT 327077 >seq1 Length=3640883 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| || ||||| || || || ||||| || |||| ||| Sbjct 1685083 ACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGAAAGAGTACGACCGTCCTCG 1685024 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| ||||||||||| |||| |||||| || || | || | || |||||||||| | Sbjct 1685023 AGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGGGATGCCCTCCTTGTCCTGG 1684964 Query 46505 ATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| ||| | | | |||||| || || || || | ||||| ||||| Sbjct 1684963 ATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATCGTTTT 1684905 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || |||||||||||||| Sbjct 1684904 CCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| || || ||||||||||| || ||||| |||| ||| Sbjct 1684293 ACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 1684234 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || || | |||||||||||||| || | | |||||| ||| Sbjct 1684233 AGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGA 1684174 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||| | ||| | | | |||||| || || || || | ||| || || || Sbjct 1684173 ATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTCTT 1684115 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || |||||||| ||||| Sbjct 1684114 CCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 111 bits (122), Expect = 2e-19 Identities = 154/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 46384 CACCA-GATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGT 46442 ||||| |||| | ||| |||||| ||||| ||||| || || || || || | || | Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCT 1684745 Query 46443 CGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCA 46502 |||| ||||| || ||||| |||| |||||||||||| | || | | |||||||||| Sbjct 1684744 CGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 1684685 Query 46503 TGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTT 46561 |||||| ||| | ||| | | | ||||| ||||| || || | ||||| || Sbjct 1684684 GGATCTTTGCCTTCA-CGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTC 1684626 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||| || || ||||| |||||||| Sbjct 1684625 TTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Score = 109 bits (120), Expect = 6e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 |||||||| || || || || || ||||| || || ||| |||| || | |||||| || Sbjct 1685299 GTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCAACTGCTTTCCA 1685240 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | |||||||| || | || | || ||||||||| |||||| ||| Sbjct 1685239 GCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTC 1685180 Query 46517 AGCGTCGCCACC-GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | ||| | || || || ||| || || |||| ||||| || || ||||||||||| Sbjct 1685179 A-CGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCCCCGTCAGCGT 1685121 Query 46576 TTTAACAAAGATTTGCATT 46594 || |||||||| |||||| Sbjct 1685120 CTTCACAAAGATCTGCATT 1685102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237502684040