Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 259 5e-64 seq1 107 2e-18 seq25 93.3 4e-14 seq6 84.2 2e-11 >seq3 Length=2745113 Score = 259 bits (286), Expect = 5e-64 Identities = 408/579 (70%), Gaps = 9/579 (2%) Strand=Plus/Minus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| |||| | || || || |||||| |||| |||||||| | | ||||| Sbjct 2542939 CAAATGGCTGAAAAGCAGACATGCGAAGTCGGTGTGCATACCCTCGTCACGGCTGATGAG 2542880 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 ||||| ||| || | ||| |||||||| || || || |||||||| ||||| | || Sbjct 2542879 CTCGTTCGAGAACGTGAGGCCAGGCATGAGTCCACGCTTCTTGAGCCAGAATATCGATGC 2542820 Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 |||| ||| || || |||| ||||| ||||| ||||||||||| || ||||| |||| Sbjct 2542819 GAAAGAGCCGGAGAAAAAGATACCCTCTACGGCGGCGAAAGCCACAAGACGCTCAGCGAA 2542760 Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 | | ||| | |||||||||| ||||| || ||||| | |||| ||| || Sbjct 2542759 AGAAGAGCTCTTGTCAGATATCCAGCGCAAAGCCCAGTCTGCCTTCTTCTTGATGCAAGG 2542700 Query 133116 CATCGTTTCGATGGCGTTCAACAAACGGAGTTT-CTCTTC-CGAGGAACGC-ACGTAGGT 133172 || || |||||||||| |||| || ||| | || | || || | | ||||| Sbjct 2542699 GATAGTCTCGATGGCGTCGAACA---GGTGTTCGCGCTGCTCGGGGTCCTTGATATAGGT 2542643 Query 133173 GTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA 133232 |||||| | ||| || | || ||||| | ||||||||| || || |||||||| Sbjct 2542642 GTCGATCAACAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTA 2542583 Query 133233 AAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTT 133292 ||||| || ||||| | |||| || || | | |||||||||||| || || || || Sbjct 2542582 GAAGCAGCGTGCCTCAGCGGCCTGAACCTCGTTGGAGAAACGCTCGACAAGGTTCTCATT 2542523 Query 133293 GACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTT 133352 |||||| ||||| ||||| ||||| || || || || ||||||| |||||||| Sbjct 2542522 GACGATACCGTCCGACGCGGCAAAAAACGCGAGGACATGGGAGATGAAAAAGCGCTCGTC 2542463 Query 133353 GTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGT 133409 | | || | || | ||||||| || | |||||||| || |||| |||||| | || Sbjct 2542462 GGCATTGAGACGATTGTTCCAGTCGTGCATATCCTTGGAGAGATCCATCTCCTCTGCAGT 2542403 Query 133410 CCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACAT 133448 ||| || || || || || || |||||||| |||| || Sbjct 2542402 CCAGAAGGAAGCTTCCGCCTTCTTGTACATGTTCCAAAT 2542364 Score = 237 bits (262), Expect = 2e-57 Identities = 394/562 (70%), Gaps = 13/562 (2%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || || |||||| ||||| ||||||||| | | ||||| ||||| ||| |||| Sbjct 2540507 CACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAGC 2540566 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 ||||||||||| ||||| || |||||||| ||||| | ||||| || || |||||| Sbjct 2540567 CCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAAG 2540626 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGC 133073 | ||| || || || |||||||| || || ||||| || || | | |||| | || Sbjct 2540627 ATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAATACCGACGTCTTGTC-GGA 2540685 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133 ||||||||||||||||| ||||| || | |||| ||| || || | ||||| || Sbjct 2540686 TATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATGCAAGGAATGGAGGTTATGGCATT 2540745 Query 133134 CAACAAACGGAGTTT---CTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATA 133190 | | || | | ||| || | | | ||| ||||||||||| ||| || Sbjct 2540746 GAGGA---GGTGATCACGCTCGTCAGGGTCTTTGATGTATGTGTCGATGAGTAGCGAGTA 2540802 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 | || ||||| | |||||| || || || |||||||| ||||| | ||||| | Sbjct 2540803 GGTCTCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCGTAGAAGCATCTTGCCTCAGC 2540862 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | || || || | || ||| |||||||| ||||||||||| || ||||||||| ||| Sbjct 2540863 AGCTTGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCGTTCACTATGCCGTCGGAGGC 2540922 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC--- 133367 |||||| || || | || | | |||||| | ||||||||| | || | || || Sbjct 2540923 GGCGAAGAAAGCTAAGACATTCGAGATGAAGTACCGCTCGTTGGCATTGAGACGGTCGTT 2540982 Query 133368 CCAGTC-GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGG 133426 |||||| | | | || | ||| ||||| | ||| || || ||||| || || || || | Sbjct 2540983 CCAGTCTGTGAG-ATCATGGGATAGGTCGATCTCTTCTACTGTCCAGAAAGATGCTTCTG 2541041 Query 133427 CTTTTTTGTACATACTCCACAT 133448 ||||||||||||| | ||| || Sbjct 2541042 CTTTTTTGTACATTCGCCAGAT 2541063 >seq1 Length=3640883 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || ||||| || || || || | || |||||| | || Sbjct 1684085 ATGCAGATCTTTGTCAAGACCCTTACGGGGAAGACGATTACGCTTGAAGTCGAGTCATCC 1684144 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||| || | || || ||||| || || ||||||| Sbjct 1684145 GACACAATCGACAACG-TGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCA 1684203 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || || || ||||| || |||| ||||||||| ||||||||| Sbjct 1684204 GCAGCGCCTCATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 1684263 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| | || || ||| | || || ||| || | ||||| Sbjct 1684264 CATTCAGAAGGAGTCTACCCTTCATCTCGTTCTTCGTCTGCGTGGCGG 1684311 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || ||||| ||||| |||| |||||| | || Sbjct 1684875 ATGCAAATCTTTGTGAAGACCTTGACAGGGAAAACGATCACTCTCGAGGTCGAGTCTTCC 1684934 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || || | || || Sbjct 1684935 GACACCATCGACAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCA 1684993 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| ||||||||||| || |||| || || || || || || Sbjct 1684994 ACAGCGCCTGATCTTCGCCGGCAAACAGCTCGAGGACGGTCGTACTCTTTCTGATTATAA 1685053 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || ||||| | || || ||| | || || ||| || | || || Sbjct 1685054 TATTCAGAAGGAGTCTACTCTTCATCTCGTTCTTCGTCTGCGTGGTGG 1685101 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || ||||| || ||||| | || ||||| | | Sbjct 1684594 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACTCTTGAGGTCGAATCTTCT 1684653 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||| |||| ||||| ||||| ||||| | ||||| Sbjct 1684654 GACACAATCGACAACG-TGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCA 1684712 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||| || || || || || || | || || || || ||||| Sbjct 1684713 GCAGCGCCTGATTTTCGCTGGAAAGCAACTCGAGGATGGTCGTACACTTTCTGATTACAA 1684772 Query 38423 CATCCAAAAGGAAGCGACGCTGCAT-TTGGTG 38453 |||||| ||||| | || || ||| |||||| Sbjct 1684773 CATCCAGAAGGAGTCTACTCTTCATCTTGGTG 1684804 >seq25 Length=839721 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || ||| | || || || |||||||| |||| |||||| || || Sbjct 327359 ATGCAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACTCTCGAGGTCGAGTCCTCC 327300 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || || | ||||| ||||| || ||| | || || Sbjct 327299 GACACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 327240 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||| || || ||| |||| |||| || || || ||||||||| Sbjct 327239 CAGCGCCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACTCTTTCTGACTACAAC 327180 Query 38424 ATCCAAAAGGA 38434 || || ||||| Sbjct 327179 ATTCAGAAGGA 327169 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || |||||||| || || || | || || ||| | | Sbjct 327077 AATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTC 327018 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || || | ||||| ||||| || || | |||| Sbjct 327017 GGACACCATCGATAACG-TGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACC 326959 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | || ||||| || |||| || | ||||| ||| || |||| Sbjct 326958 AACAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTACA 326899 Query 38422 ACATCCAAAAGGAA 38435 |||| || |||||| Sbjct 326898 ACATTCAGAAGGAA 326885 >seq6 Length=2010026 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 ||||||||||||| ||||| | ||| ||||| ||||| || || | ||||| | | || Sbjct 1330147 CCGACCAACAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTTTGAGCG 1330088 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | ||||||||||| ||||| | || || ||| ||||||| ||| Sbjct 1330087 ATTACAACATCCAGAAGGAGTCCACCCTCCATCTGGTGCTTCGT 1330044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172005975680