Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 114 5e-20 seq15 91.5 6e-13 seq25 86.0 2e-11 >seq1 Length=3640883 Score = 114 bits (126), Expect = 5e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||| || || || || || || || || || || ||| Sbjct 1684313 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACGATCACGCTGGAGGTGGAGTCCTCT 1684372 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| || || ||||||||||| || ||||| |||||||| Sbjct 1684373 GACACAATTGATAACGTCAAAGCCAAGATCCAAGATAAGGAGGGCATTCCCCCTGATCAG 1684432 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | ||||| || | |||||||| | || ||| ||||||| || Sbjct 1684433 CAACGTCTCATCTTCGCTGGGAAGCAGTTGGAAGATGGTCGGACGTTGTCGGATTACAAC 1684492 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | |||||||| Sbjct 1684493 ATTCAGAAGGAGTCGACACTTCA 1684515 Score = 91.5 bits (100), Expect = 6e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || ||||||| || ||||| |||||||| || ||||| ||| Sbjct 1684594 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACTCTTGAGGTCGAATCTTCT 1684653 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || ||| || || || ||||| || ||||||||||| || Sbjct 1684654 GACACAATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 1684713 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | |||||| | || || ||||| || ||||| | || | | ||||| || Sbjct 1684714 CAGCGCCTGATTTTCGCTGGAAAGCAACTCGAGGATGGTCGTACACTTTCTGATTACAAC 1684773 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | || ||||| Sbjct 1684774 ATCCAGAAGGAGTCTACTCTTCA 1684796 >seq15 Length=1308937 Score = 91.5 bits (100), Expect = 6e-13 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || | ||||| || || || ||||||||||| ||||||||||| || ||||||| Sbjct 754389 ATGCTGTCGTCACTGTCCCTGCGTACTTCAATGATGCGCAACGGCAAGCGACCAAAGATG 754448 Query 451380 CAGG-ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 |||| ||| ||||| ||| | |||| | || | || || || || || || || ||| Sbjct 754449 CAGGTACA-ATTGCCGGTCTTGATGTCTTGCGGGTGATCAACGAGCCCACTGCGGCCGCT 754507 Query 451439 CTAGCATATGGACT 451452 || |||||||| || Sbjct 754508 CTCGCATATGGTCT 754521 >seq25 Length=839721 Score = 86.0 bits (94), Expect = 2e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || ||||| || || || ||||||||||| ||||| || || Sbjct 327077 AATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTC 327018 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| || | || || ||||| || ||||| || || |||||||| || Sbjct 327017 GGACACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCA 326958 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | || || | || || ||| | || ||||| | || | | ||||| || Sbjct 326957 ACAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTACAA 326898 Query 391229 TATTGATAAGGA 391240 ||| | ||||| Sbjct 326897 CATTCAGAAGGA 326886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975715185135716