Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq18 102 6e-16 seq15 98.7 8e-15 >seq18 Length=715188 Score = 102 bits (112), Expect = 6e-16 Identities = 200/293 (68%), Gaps = 6/293 (2%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || || || ||||| ||||| ||||| ||||| | ||| | || | ||||| | || Sbjct 271686 ACTAGGCGGTTATCGAAATCCTCACCGCCCAAGTGAGTGTCACCGGCGGTAGCCTTGACC 271745 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || || |||| | || || | ||||| || || || || | ||| Sbjct 271746 TCGAAGATGCCCTCCTCAATGGTCAGCAGCGACACATCGAAAGTGCCTCCTCCAAGATCG 271805 Query 518135 AAAATAAGTACATTCATTTCTTTGTCT-TGGT--TTTTATCAAGACCATACGCAAAAGCA 518191 || ||||| |||||| || | | |||| |||| || ||||| || || | |||| Sbjct 271806 AATATAAGGACATTCCGCTC---GCCAGTGGTCTTTTTGTCGAGACCGTAGGCGATAGCA 271862 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 |||||||| || || || || || | | || || || |||| || |||| ||||| Sbjct 271863 GCAGCAGTAGGCTCGTTGATGATACGGAGTACGTTCAGTCCAGAGATCGTTCCGGCATCC 271922 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 || || || || | ||| || ||||| || || |||||||| |||| ||| || Sbjct 271923 TTCGTCGCCTGACGTTGCGAGTCGTTGAAGTAAGCAGGAACGGTAACAACAGC 271975 >seq15 Length=1308937 Score = 98.7 bits (108), Expect = 8e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 518170 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 518229 |||||||||||| || | ||| || ||||| || || || || | | ||| |||| ||| Sbjct 754525 ATCAAGACCATATGCGAGAGCGGCCGCAGTGGGCTCGTTGATCACCCGCAAGACATCAAG 754466 Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289 ||| |||||| | ||||||||||| || ||||| | ||| | ||| || || || ||||| Sbjct 754465 ACCGGCAATTGTACCTGCATCTTTGGTCGCTTGCCGTTGCGCATCATTGAAGTACGCAGG 754406 Query 518290 AACAGTAATAACGGCAT 518306 ||||| | || |||| Sbjct 754405 GACAGTGACGACAGCAT 754389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780816097841662