Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq18 203 4e-47 seq4 107 2e-18 seq27 95.1 2e-14 seq5 91.5 2e-13 >seq18 Length=715188 Score = 203 bits (224), Expect = 4e-47 Identities = 296/412 (72%), Gaps = 16/412 (4%) Strand=Plus/Plus Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAA 7462 ||||| || || || || ||||| | | |||||| | || ||| | | ||||||| Sbjct 271647 TTCTTGTGCTTCCGCTTGAACTCCTGAACGAAGTGGTTGACTAGGCGGTT---ATCGAAA 271703 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || ||||| |||||||| || || || ||||| || ||||| || ||||| || | ||| Sbjct 271704 TCCTCACCGCCCAAGTGAGTGTCACCGGCGGTAGCCTTGACCTCGAAGATGCCCTCCTCA 271763 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | | || ||| ||||| || || || || || || || || || || || ||| Sbjct 271764 ATGGTCAGCAGCGACACATCGAAAGTGCCTCCTCCAAGATCGAATATAAGGACATTCCGC 271823 Query 7583 TCGTC----GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 ||| | |||||| || ||||||||||| |||||||| || || || || || || Sbjct 271824 TCGCCAGTGGTCTTT----TTGTCGAGACCGTAGGCGATAGCAGCAGCAGTAGGCTCGTT 271879 Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 || ||||| || |||||| |||| || ||| | ||||| |||||||| || ||||| Sbjct 271880 GATGATACGGAGTACGTTCAGTCCAGAGATCGTTCCGGCATCCTTCGTCGCCTGACGTTG 271939 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC-TTTCTTACCGAGAT 7757 ||| ||||| ||||| || || || || || || |||| || || || || || | Sbjct 271940 CGAGTCGTTGAAGTAAGCAGGAACGGTAACAACAGCGT-TGTTACAATTGACGCCCAGGT 271998 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | || |||||| | || ||||| || ||||||||| |||||||| ||||| Sbjct 271999 AGGACTCCGCGGTCTCCTTCATCTTCAGAAGAACCATGGATGAAATTTCTTC 272050 Score = 125 bits (138), Expect = 9e-24 Identities = 162/223 (73%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 7893 AATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTG 7952 ||| ||| |||||| |||| || | ||| | ||||| | || || |||||||| | Sbjct 272191 AATGTTTGATATCGGCTTGCACTTCAGCGTCGGCGAACTTGCGCCCAATGAGACGCTTGG 272250 Query 7953 CATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012 | || || || ||||| | ||||||||| || |||||||||||| || || || || | Sbjct 272251 CGTCGAAGACAGTGTTGTGGGGGTTCATCGCAACTTGGTTCTTCGCGGCATCGCCAATCA 272310 Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGT 8072 || || || | | | || | |||||| || || || ||||| || || ||||||| Sbjct 272311 ACCGCTCGTTGT---CGGAGAATGAGACGTATGAGGGTGTTGTTCGGTTACCCTGGTCGT 272367 Query 8073 TCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 | ||||| || || || || ||||||||||| || |||||||| Sbjct 272368 TGGCAATGATCTCAACACGATCGTTTTGCCAAACACCGACGCA 272410 >seq4 Length=2243620 Score = 107 bits (118), Expect = 2e-18 Identities = 260/391 (66%), Gaps = 2/391 (1%) Strand=Plus/Plus Query 7333 AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392 ||| | ||| | ||| || || || || || | || | |||||| || ||||| | | Sbjct 939263 AGAAAGCGTCCTCTTGGCACGTTCGCAAGCACTCCGGAGACGACGCAGAGCACGGGCATC 939322 Query 7393 ACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCT 7452 | |||| || || || ||| |||| ||||| | |||||| | || || | Sbjct 939323 ATCGGAGATGTCAAGATTGGTTTTCCGTTGGAACTCCTTCTTGAAGTGCTGCAGCAGGTT 939382 Query 7453 CGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT 7512 || || || |||||||||||||| ||||| || || || ||||| || | || | Sbjct 939383 GTTGTCAAAGTCCTCACCACCCAAGTGAGTATCACCAGCAGTGGCTTTTACAGCGAACAC 939442 Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 ||| || ||||| | | ||| ||||| || || || || ||||| || || ||||| Sbjct 939443 ACCGCCAGTGATGTTGAGGAGCGAGACATCGAAAGTTCCTCCTCCCAGATCGAAGATGAG 939502 Query 7573 TACGTTCGTATCGTCG-TCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 |||||| | || || || | | ||||||||||| || || || || || || | Sbjct 939503 CACGTTCTTCTCAGCGCTCGAT-TGACGGTCGAGACCGTAGGCAATGGCAGCGGCAGTGG 939561 Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 | || ||||| ||||| || | || ||||| || | | ||||| || || || Sbjct 939562 GCTCGTTAATGATACGGAGTACCTCGAGACCAGCGATGGAGCCAGCATCCTTGGTTGCCA 939621 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || || ||||| ||||| || ||||| Sbjct 939622 AACGCTGGGAGTCGTTGAAGTATGCAGGGAC 939652 >seq27 Length=764048 Score = 95.1 bits (104), Expect = 2e-14 Identities = 206/307 (67%), Gaps = 1/307 (0%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || |||||||| || || |||||||| || || || ||| || || || | ||| Sbjct 517249 TTCTACCAGGCATCCACCTCCGAGCTCTATGGAAAGGTCGTTGAGACGCCGCAGAGCGAA 517308 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 | || ||||| ||||| || || || ||||| || || || || || || ||| Sbjct 517309 ACGACGCCGTTCTACCCCCGCTCGCCGTATGGTGTCGCGAAGCTGTACGGCTACTGGATC 517368 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || | || || | || | |||||||||| || ||||| || || ||||||||||| Sbjct 517369 ACCATCAACTACCGTGAGGCGTACGGTATGTACGCGTGCAACGGCATCCTGTTCAACCAC 517428 Query 22624 GAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAAT 22683 || ||| | || || | ||||| || || || || | | || || ||| || Sbjct 517429 GAGAGCCCGCGGCGTGGGCGGACGTTCGTTACGCGCAAGATCTCCCGCGCTGCCGCGGAT 517488 Query 22684 ATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGG 22743 ||| | || |||| ||| | ||||| || ||| | || ||||| || |||||| Sbjct 517489 ATCTCTTTGGGCAAAC-GTCATGCCTCTACCTCGGCAACTTGGACGCGAAGCGTGATTGG 517547 Query 22744 GGTCATG 22750 || |||| Sbjct 517548 GGCCATG 517554 >seq5 Length=2125601 Score = 91.5 bits (100), Expect = 2e-13 Identities = 174/256 (68%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||||||||| | || || || || ||||| || || || |||| ||| Sbjct 724662 TCGAAGTCTTCACCACCAAGATGGGTGTCACCGGCGGTGGCCAGCACCTCGAAGACACCG 724721 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | ||| || || || || ||||| || || || | | || | Sbjct 724722 TCATCAATGGACAGAAGCGAGACGTCGAAAGTTCCACCTCCGAGATCGTAGACGACGATT 724781 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || || | ||||| || || ||||| ||||| || || ||||| || ||| Sbjct 724782 TGAGACTCTCCGCC---CTTCTTGTCAAGGCCGTATGCGATCGCTGCAGCCGTCGGCTCA 724838 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || |||||| | ||||| ||||| ||| | || || || || ||||| || Sbjct 724839 TTGATGATGCGAAGAACCTGGAGGCCGGCAATTGTTCCTGCGTCCTTGGTGGCTTGACGC 724898 Query 7697 TGCGAATCGTTAAAGT 7712 || | |||||| |||| Sbjct 724899 TGAGCATCGTTGAAGT 724914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131791726680