Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 100 4e-16 seq3 98.7 1e-15 >seq1 Length=3640883 Score = 100 bits (110), Expect = 4e-16 Identities = 166/235 (71%), Gaps = 15/235 (6%) Strand=Plus/Plus Query 176825 TGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTT-----TGATGTGAGCT 176879 || || || ||||| |||||||||| | | || ||| | ||| |||| ||| | Sbjct 412080 TGCTGCAGTCCCAAAATCTTCTTGATGTTCTGGATCTCCTCGTTCTTCATGATCTGATC- 412138 Query 176880 GTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGT 176939 ||| | ||||| || || ||| ||| ||||| ||||||||||| ||||||| Sbjct 412139 GTGCTTC----GCATCTCGCACGTTCAGGAGCTTTCCACGGAGAGGGAAGACGCCGTAGT 412194 Query 176940 GATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTG 176999 || |||||||| ||| ||||| || ||||| |||||||| || ||||| ||||| | Sbjct 412195 TGTCACGACCAACAACACCCAGACCTGCGACCGCTAGCGTTTTGGCGGAATC-CCCTCGG 412253 Query 177000 TCACGATGAGTGTACA--CTTGCCAGATTGTGCCGTACCCGCCTTGTTCGCATCA 177052 | | |||||| ||||| | || || || || || || |||||||||||| Sbjct 412254 TAAGGATGAGCGTACATTCATGGGCCTTTTTG--GTGCCTGCATTGTTCGCATCA 412306 >seq3 Length=2745113 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 102087 CAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATG 102146 || || || || |||||| | || | || || || | ||||| || || |||||| || Sbjct 2542673 CACCTGTTCGACGCCATCGAGACTATCCCTTGCATCAAGAAGAAGGCAGACTGGGCTTTG 2542732 Query 102147 AAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGT 102205 ||| | | |||| | | ||| || |||||||| || | || || || || Sbjct 2542733 CGCTGGATATCTGACAAGAGCTC-TTCTTTCGCTGAGCGTCTTGTGGCTTTCGCCGCCGT 2542791 Query 102206 TGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCT 102265 ||||||||||| ||||| || || ||| | || | |||||||||||||| || || Sbjct 2542792 AGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTCTGGCTCAAGAAGCGTGGACT 2542851 Query 102266 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||||| || ||| ||||| |||||||| ||| ||||||||||| Sbjct 2542852 CATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGACGAGGG 2542899 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 |||| ||||| ||| | || || || ||| || || ||||||||||| || |||||| Sbjct 2540667 TTTGGGGAGCGGCTCGTTGCTTTCGCCGCTGTGGAAGGCATCTTCTTCTCCGGATCCTTC 2540608 Query 102234 TGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 ||| | || | |||||||||||||| || |||||||| || || ||||| ||||| Sbjct 2540607 -GCGTCAATATTCTGGCTCAAGAAGCGCGGACTCATGCCCGGGCTGACGTTCTCTAACGA 2540549 Query 102293 GCTTATCTCTCGTGACGAGGG 102313 ||| ||| || |||||||| Sbjct 2540548 GCTCATCAGCCGCGACGAGGG 2540528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741414571440