Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12]
127 sequences; 39,289,314 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 3e-11
seq1 82.4 9e-11
>seq3
Length=2745113
Score = 84.2 bits (92), Expect = 3e-11
Identities = 149/214 (70%), Gaps = 5/214 (2%)
Strand=Plus/Minus
Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587
||||||||| || ||| || |||||||||||||| | ||||| ||||| || ||
Sbjct 2542885 GATGAGCTCGTTCGAGAACGTGAGGCCAGGCATGAGTCCACGCTTCTTGAGCCAGAATAT 2542826
Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTC 119647
| ||| || || || ||||| ||||| || ||||||||| | ||||||||
Sbjct 2542825 CGATGCGAAAGAGCCGGAGAAAAAGATACCCTCTACGGCGGCGAAAGCCACAAGACGCTC 2542766
Query 119648 AGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGCCCAGTTGGCCTTACGCTCTA 119703
||| ||| | ||| |||||| | ||| | |||||||| ||||| || |
Sbjct 2542765 AGCGAAA-GAAGAGCTCTTGTCAGATATCCAGCGCAAAGCCCAGTCTGCCTTCTTCTTGA 2542707
Query 119704 TGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTG 119737
|||| |||| ||| | |||||| ||||| || ||
Sbjct 2542706 TGCAAGGGATAGTCTCGATGGCGTCGAACAGGTG 2542673
>seq1
Length=3640883
Score = 82.4 bits (90), Expect = 9e-11
Identities = 110/149 (74%), Gaps = 3/149 (2%)
Strand=Plus/Minus
Query 11760 TCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA-ACACTGAATGAAGGGAACAT 11818
||| ||||| ||||||||||| ||||| | | | | || ||| ||| |||||| || |
Sbjct 1986351 TCCGACACCGACGAACATCTCGACGAACTCGGAGCCGGATACAGAGAA-GAAGGGTACGT 1986293
Query 11819 TAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGA 11878
| | |||||| ||| | || || ||||| |||||||||||||| || | |||| |
Sbjct 1986292 TCGCCTCACCGGCGGCGCCTTC-GCAAGGAGGGTCTTACCCGTACCGGGCGGGCCAGAAA 1986234
Query 11879 GAAGGGCGCCACGGGGGATCTTGGCACCA 11907
| | || ||||| |||||||| || |||
Sbjct 1986233 GGATAGCACCACGAGGGATCTTCGCGCCA 1986205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975065000600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |