Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 6e-13 seq1 89.7 6e-13 >seq3 Length=2745113 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| | |||||| || ||| || || || || ||||| ||||| |||||||| || Sbjct 2542906 GTGCATACCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCAGGCATGAGTCC 2542847 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | ||| || |||||||| ||||||||||| || Sbjct 2542846 ACGCTTCTTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAAAAAGATACCCTCTACGGC 2542787 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCAT 117461 || || || | ||| ||||| ||||| || ||| | ||||| | ||| || Sbjct 2542786 GGCGAAAGCCACAAGACGCTCAGCGAAAGA---AGAGCTCTTGTCAGATATCCAGCGCAA 2542730 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 ||||| | |||||||||| || || || | ||| | |||||| || || Sbjct 2542729 AGCCCAGTCTGCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGCGTCGAA 2542679 >seq1 Length=3640883 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/196 (71%), Gaps = 11/196 (6%) Strand=Plus/Plus Query 169275 TGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTT-----TGATGTGAGCT 169329 || || || ||||| |||||||||| | | || ||| | ||| |||| ||| | Sbjct 412080 TGCTGCAGTCCCAAAATCTTCTTGATGTTCTGGATCTCCTCGTTCTTCATGATCTGATC- 412138 Query 169330 GTGCCACTGAAGCGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGT 169389 |||| | || || || || ||| ||| ||||||||||| |||||||| |||| Sbjct 412139 GTGCTTC----GCATCTCGCACGTTCAGGAGCTTTCCACGGAGAGGGAAGACGCCGTAGT 412194 Query 169390 GATCACGTCCAACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCG 169449 ||||| ||||| || ||||| |||||||| || ||||| || ||||| ||||| | Sbjct 412195 TGTCACGACCAACAACACCCAGACCTGCGACCGCTAGCGTTTTGGCGGAATC-CCCTCGG 412253 Query 169450 TGACAATGAGGGTACA 169465 | | ||||| ||||| Sbjct 412254 TAAGGATGAGCGTACA 412269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979863405480