Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq25 96.9 2e-15 seq1 91.5 1e-13 >seq25 Length=839721 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/214 (71%), Gaps = 9/214 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | |||||||| ||||||||||| || || || || | || |||| || Sbjct 326867 ACCAAGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTC 326926 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || ||||| || || || || ||||| | || | ||||||||||| Sbjct 326927 CAATTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTG 326986 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947 ||||||| || || | ||||||| | ||| | |||||| || | || || | Sbjct 326987 AATCTTCGCCTTCAC----GTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCG 327042 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| || ||||| || ||||||||||| Sbjct 327043 TCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 327076 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/202 (71%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 || || || ||||||||||| ||||| ||||| | || | || |||| ||| ||||| Sbjct 327163 GTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCA 327222 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || ||||| || | || | ||||||||||| ||||||| || Sbjct 327223 GCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTC 327282 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || | ||||| || || ||| || |||| || ||||| || || || | Sbjct 327283 AC--AT--TGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAA 327338 Query 34961 AGTCTTCACAAAGATCTGCATA 34982 ||||| ||||||||||||||| Sbjct 327339 CGTCTTGACAAAGATCTGCATA 327360 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/214 (71%), Gaps = 9/214 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||||| || ||||| || || ||||| ||||| | || |||| || Sbjct 327428 ACCAAGATGCAACGTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTC 327487 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || ||||| || |||||||| | || | || ||||| || Sbjct 327488 GAGCTGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTG 327547 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||||| ||||| || | ||||| || || ||| || || | ||| || | Sbjct 327548 AATCTTCGCCTTGAC--AT--TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAG 327603 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| | ||||| |||||||||||||| Sbjct 327604 TCTTCCCCGTCAACGTCTTGACAAAGATCTGCAT 327637 >seq1 Length=3640883 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| || || ||||||||||||||||| || || || | || | || || Sbjct 1685312 ACCAAGGTGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTC 1685253 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| ||||| || || || || || ||||| || | || | || |||||||| Sbjct 1685252 CAACTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTG 1685193 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || ||| | || | || | ||| || || | ||| || || || Sbjct 1685192 GATCTTTGCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTT 1685133 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || |||||||||||||||||||| Sbjct 1685132 CCCCGTCAGCGTCTTCACAAAGATCTGCAT 1685103 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || ||| | || | || || ||||| || || ||||| Sbjct 1684275 TCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAAG 1684216 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||| || |||||| || ||| Sbjct 1684215 ATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTTGCCTTCACGTTG 1684156 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | || || || || ||||| || ||||| ||| Sbjct 1684155 TCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTCTTCCCCGTAAGGGTCTTGACA 1684096 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 1684095 AAGATCTGCATA 1684084 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || ||||| | | || |||| |||| ||| || || || || Sbjct 1684503 TCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAACTGCTTCCCAGCGAAG 1684444 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||| || | || | |||||||| || ||||| ||||||| Sbjct 1684443 ATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATCTTGGCTTTGACGTTA 1684384 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || ||| || || | || || || |||||||| | |||||| || Sbjct 1684383 TCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCCGTCAAAGTCTTGACG 1684324 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 1684323 AAAATCTGCATA 1684312 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| ||||| || ||||| | || | || || |||||||| ||||| || Sbjct 1685065 TCCTTCTGAATATTATAATCAGAAAGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAG 1685006 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || || || | || | ||||||||||| |||||| |||||| Sbjct 1685005 ATCAGGCGCTGTTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 1684946 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| || || ||||| || || | ||||||||| Sbjct 1684945 TCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACA 1684886 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 1684885 AAGATTTGCATA 1684874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633097528056