Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 279 1e-69 >seq3 Length=2745113 Score = 279 bits (308), Expect = 1e-69 Identities = 400/563 (71%), Gaps = 3/563 (1%) Strand=Plus/Minus Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 |||| || || ||||| |||||| || ||||| |||||||||||| |||| ||||| Sbjct 2542926 AGCAGACATGCGAAGTCGGTGTGCATACCCTCGTCACGGCTGATGAGCTCGTTCGAGAAC 2542867 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 ||| |||||||||| || | || ||||||||||| || | ||||||||||| ||| Sbjct 2542866 GTGAGGCCAGGCATGAGTCCACGCTTCTTGAGCCAGAATATCGATGCGAAAGAGCCGGAG 2542807 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 || ||||| ||||| || || ||||| || || | ||| ||||||||| | ||||| Sbjct 2542806 AAAAAGATACCCTCTACGGCGGCGAAAGCCACAAGACGCTCAGCGAAAGAAGAGCTCTTG 2542747 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 || || |||||| | |||||||||||||||||||||||||| || || ||||| ||| Sbjct 2542746 TCAGATATCCAGCGCAAAGCCCAGTCTGCCTTCTTCTTGATGCAAGGGATAGTCTCGATG 2542687 Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCG 48424 || ||| || | | || || | | |||| | |||||| || || | | | Sbjct 2542686 GCGTCGAACAGGTGTTCGCGCTGCTCGGGGTCCTTGATATAGGTGTCGATCAACAGCGAG 2542627 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 || |||| ||||| | ||||| || |||||||| ||||||||| | |||||| Sbjct 2542626 TAGGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCAGCGTGCCTCA 2542567 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 |||| || || ||||||| | ||| | || ||||||||||| || || || || Sbjct 2542566 GCGGCCTGAACCTCGTTGGAGAAACGCTCGACAAGGTTCTCATTGACGATACCGTCCGAC 2542507 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCA--- 48601 || ||||| || || |||||||| | |||| |||||||| | ||||| | Sbjct 2542506 GCGGCAAAAAACGCGAGGACATGGGAGATGAAAAAGCGCTCGTCGGCATTGAGACGATTG 2542447 Query 48602 TTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 |||||| | || | || ||| || |||| || || ||||||||||||| || Sbjct 2542446 TTCCAGTCGTGCATATCCTTGGAGAGATCCATCTCCTCTGCAGTCCAGAAGGAAGCTTCC 2542387 Query 48662 GCTTTTTTGTACATGCCCCATAT 48684 || || ||||||||| ||| || Sbjct 2542386 GCCTTCTTGTACATGTTCCAAAT 2542364 Score = 224 bits (248), Expect = 2e-53 Identities = 389/561 (69%), Gaps = 11/561 (2%) Strand=Plus/Plus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || || ||||| | |||| ||| ||||| |||||||||||| |||| ||||| || Sbjct 2540507 CACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAGC 2540566 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | || ||||||||||| |||| |||||| || || ||||||||| Sbjct 2540567 CCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAAG 2540626 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 ||||| ||||| || ||||| || ||||| ||| || || | ||||||| || Sbjct 2540627 ATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAATACCGACGTCTTGTCGGAT 2540686 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 |||||| ||||||||||| || |||||||||||||| || || | |||||| | Sbjct 2540687 ATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATGCAAGGAATGGAGGTTATGGCATTG 2540746 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTAC 48427 | ||| | | | ||| | | ||| | || || |||| ||| | ||| Sbjct 2540747 AGGAGGTGATCACGCTCGTCAGGGTCTTTGATGTATGTGTCGATGAGTAGC---GAGTAG 2540803 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 |||| ||||| | |||||||| |||||||| ||||||||| || |||||| Sbjct 2540804 GTCTCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCGTAGAAGCATCTTGCCTCAGCA 2540863 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 | || || || | ||||| | ||| | ||||| || || ||||| || || || || Sbjct 2540864 GCTTGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCGTTCACTATGCCGTCGGAGGCG 2540923 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTC 48604 || ||||| || | ||||| | ||| | ||||||||| ||||| | ||| Sbjct 2540924 GCGAAGAAAGCTAAGACATTCGAGATGAAGTACCGCTCGTTGGCATTGAGACGGTCGTTC 2540983 Query 48605 CAGCCCTGT-ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 ||| |||| | || | | ||||| | ||||| || |||||||| || || ||| Sbjct 2540984 CAG-TCTGTGAGATCATGGGATAGGTCGATCTCTTCTACTGTCCAGAAAGATGCTTCTGC 2541042 Query 48664 TTTTTTGTACATGCCCCATAT 48684 |||||||||||| | ||| || Sbjct 2541043 TTTTTTGTACATTCGCCAGAT 2541063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531321191680