Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 185 2e-41 seq11 87.8 3e-12 >seq3 Length=2745113 Score = 185 bits (204), Expect = 2e-41 Identities = 438/652 (67%), Gaps = 16/652 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || || |||||| || || ||||| ||||| Sbjct 2542364 ATTTGGAACATGTACAAGAAGGCGGAAGCTTCCTTCTGGACTGCAGAGGAGATGGATCTC 2542423 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 ||||||| ||| ||| |||| || || ||| | ||| ||| ||| ||| | | Sbjct 2542424 TCCAAGGATATGCACGACTGGAACAATCGTCTCAATGCCGACGAGCGCTTTTTCATCTCC 2542483 Query 25597 G-TGT--TGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 ||| | || || ||||| || || || ||||| || || ||||| || |||| | Sbjct 2542484 CATGTCCTCGCGTTTTTTGCCGCGTCGGACGGTATCGTCAATGAGAACCTTGTCGAGCGT 2542543 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| ||| || || ||| || ||||| || |||||||| |||||||| || Sbjct 2542544 TTCTCCAACGAGGTTCAGGCCGCTGAGGCACGCTGCTTCTACGGCTTCCAGATTATGATG 2542603 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| ||| || | ||| |||| || || || | ||| | Sbjct 2542604 GAGAACATCCACTCCGAGACCTACTC---GCTGTTGATCGACACCTATATCAAGGACCCC 2542660 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | || | || | ||||| | ||||||||| || || ||||||||| |||||| Sbjct 2542661 GAGCAGCGCGAACACCTGTTCGACGCCATCGAGACTATCCCTTGCATCAAGAAGAAGGCA 2542720 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| || ||||| | | | || |||| || | || | ||||| || || || Sbjct 2542721 GACTGGGCTTTGCGCTGGAT-ATCTGACAAGAGCTCTTCTTTCGCTGAGCGTCTTGTGGC 2542779 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 || || || || ||||| ||||||||| ||| || || || | || ||||||||||| Sbjct 2542780 TTTCGCCGCCGTAGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTCTGGCTCAA 2542839 Query 25950 GCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 | || | |||| |||||| || || || || ||||||||||||||| | ||||||| Sbjct 2542840 GAAG-CGTGGACTCATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGACGAGG 2542898 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 || | |||| || || || || ||||| | || |||| ||| | ||| || Sbjct 2542899 GTATGCACACCGACTTCGCATGTCTGCTTTTCA---GCCATTTGAAGCGGCGTCCTCATC 2542955 Query 26069 AAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | | || || ||||||| |||||||| | ||||||| ||||||| Sbjct 2542956 CCAACGTCATCCGCAAGATCATCACTGAGGCTGTTGCGATCGAGCAGGAGTT 2543007 Score = 150 bits (166), Expect = 3e-31 Identities = 323/476 (68%), Gaps = 15/476 (3%) Strand=Plus/Minus Query 25574 ACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGA 25633 |||||| | | || || | | || || || ||||| || ||||| || || ||||||| Sbjct 2540963 ACGAGCGGTACTTCATCTCGAATGTCTTAGCTTTCTTCGCCGCCTCCGACGGCATAGTGA 2540904 Query 25634 ACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCT 25693 |||| ||||| |||| | ||| | | || || || | ||||| | || |||| Sbjct 2540903 ACGAAAATCTCGTCGAGCGCTTCTCTAACGAGGTTCAAGCTGCTGAGGCAAGATGCTTCT 2540844 Query 25694 ACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG- 25752 |||| |||||||| || || || | ||||| ||| || | ||| || || Sbjct 2540843 ACGGCTTCCAGATAATGATAGAGAACATCCACTCCGAGACCTACTC---GCTACTCATCG 2540787 Query 25753 --ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATAC 25810 || ||||| | |||| | |||| | |||| || | |||||| ||| | Sbjct 2540786 ACACATACATCAAAGACCCTGACGAGCGTGATCACCTCCTCAATGCCATAACCTCCATTC 2540727 Query 25811 CCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG--CGCTAC 25868 | ||||||||| ||| || ||||| || ||||| | | ||| || || Sbjct 2540726 CTTGCATCAAGAAGAAAGCCGACTGGGCGCTGCGCTGGATATCCGACAAGACGTCGGTA- 2540668 Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928 ||||| |||||||| || || || || |||||||| |||||||| ||| ||| || || Sbjct 2540667 -TTTGGGGAGCGGCTCGTTGCTTTCGCCGCTGTGGAAGGCATCTTCTTCTCCGGATCCTT 2540609 Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACG 25987 ||| | || |||||||||||| || | |||| ||||||||||||| || || |||| Sbjct 2540608 CGCGTCAATATTCTGGCTCAAGAAGC-GCGGACTCATGCCCGGGCTGACGTTCTCTAACG 2540550 Query 25988 AGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTG---CCTGCTCTAC 26040 ||||||||||| | |||||||| | || | || || || || ||||||| || Sbjct 2540549 AGCTCATCAGCCGCGACGAGGGCATGCATACCGACTTCGCGTGTCTCCTGCTCCAC 2540494 Score = 84.2 bits (92), Expect = 4e-11 Identities = 122/169 (72%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 26152 GGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTG--T 26209 ||||||||| | |||||| |||| ||||| |||| || ||||| | |||| || | Sbjct 2543091 GGCATGAACGCGACGCTCATGTGCCAGTACATCGAGTTCGTTGCCGATCGTCTGGTGGTT 2543150 Query 26210 GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACA 26269 ||| | | || | ||| |||||| || | ||||| |||||||||||||| | | Sbjct 2543151 GCCCTCGGTAACCCTA-AGA-TCTACAACGCGACGAACCCTTTCGACTTTATGGATATGA 2543208 Query 26270 TATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTA 26318 | ||| || |||| ||||| |||||||| || ||| | ||| ||||| Sbjct 2543209 TCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGTCTCAGACTA 2543257 >seq11 Length=1765784 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 222044 AAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCG 222103 || |||||||| ||||| || || | ||| ||||| | | || ||||| ||| Sbjct 1056876 AATAGGTCCGGAATCCAAAGAGCATAAAACAGATCCCGAGCGCGGACTTCCTCTTTGCCA 1056817 Query 222104 TTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACG 222163 | ||| || | || || | || || |||| ||||||||||| ||||| | |||| Sbjct 1056816 TGGTTCTTACGAAGGTCGAGGAATTCGAAAACATCAGCGTGCCAGGGCTCAATGTAGATC 1056757 Query 222164 GCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAG-AGCGTTGAA 222222 || | |||||||| ||||||||||| |||||||| | ||| ||| |||| | | Sbjct 1056756 GCGAATGCGCCGGGCCGCTTGTTGCCTCCCTGATCTA-CATATCGAGCAGTCGCGTCGTA 1056698 Query 222223 GATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCC 222267 | |||||| |||| || | |||||||| |||||||| || Sbjct 1056697 GGCGCGAAGCATCGGGACGATGCCGTTGGAGTAGCCGTTGGTTCC 1056653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843325458880