Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq25 84.2 4e-11 >seq25 Length=839721 Score = 84.2 bits (92), Expect = 4e-11 Identities = 129/184 (70%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || ||||| || | | || | || |||||||| || |||||||| || | | Sbjct 326894 AATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGCTTGCCAGCAAAGATGAGACG 326953 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 |||||||||||| || || || || || || || || || || || ||| || || Sbjct 326954 CTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTATCGATGGT 327013 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || ||||| || || || |||||||| || || || || | || || | ||| ||||| Sbjct 327014 GTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTG 327073 Query 172067 CATT 172070 |||| Sbjct 327074 CATT 327077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905134563096600