Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq11 89.7 5e-13 seq25 87.8 2e-12 >seq1 Length=3640883 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || |||||||| ||||| || | || Sbjct 1684085 ATGCAGATCTTTGTCAAGACCCTTACGGGGAAGACGATTACGCTTGAAGTCGAGTCATCC 1684144 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||| || || || || || || |||||||| || Sbjct 1684145 GACACAATCGACAACGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 1684204 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | |||||||| ||||| ||||| ||||| | | | | || || || ||| Sbjct 1684205 CAGCGCCTCATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 1684264 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| || || || || Sbjct 1684265 ATTCAGAAGGAGTCTACCCTTCA 1684287 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || || || || || ||||| || || || || | Sbjct 1684313 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACGATCACGCTGGAGGTGGAGTCCTCT 1684372 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| ||||||||||| || || || || || || ||||| Sbjct 1684373 GACACAATTGATAACGTCAAAGCCAAGATCCAAGATAAGGAGGGCATTCCCCCTGATCAG 1684432 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || ||||| ||| |||| ||| | | |||| ||||| ||| Sbjct 1684433 CAACGTCTCATCTTCGCTGGGAAGCAGTTGGAAGATGGTCGGACGTTGTCGGATTACAAC 1684492 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| |||||||| || Sbjct 1684493 ATTCAGAAGGAGTCGACACTTCA 1684515 Score = 102 bits (112), Expect = 7e-17 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || ||||| || | || || || | | Sbjct 1685103 ATGCAGATCTTTGTGAAGACGCTGACGGGGAAGACTATCACCTTGGAGGTCGAGTCGTCG 1685162 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || || ||||||||| ||||| ||||| || ||||| ||||| Sbjct 1685163 GATACAATTGACAACGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 1685222 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| ||||||| | | | | || ||||||||| Sbjct 1685223 CAGCGTCTCATCTTCGCTGGAAAGCAGTTGGAGGACGGGCGTACGCTCTCCGATTATAAC 1685282 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 ||||| || || || || || ||||||| Sbjct 1685283 ATTCAGAAAGAGAGTACCCTTCACCTTGGTG 1685313 >seq11 Length=1765784 Score = 89.7 bits (98), Expect = 5e-13 Identities = 268/406 (66%), Gaps = 16/406 (4%) Strand=Plus/Minus Query 138580 CCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAA 138639 |||| ||||||| ||| | ||||| |||||| || | | || ||||||| || Sbjct 1057805 CCCAAAATCTGACTCGTTGAAGCGGTGGGCATGGGGGCTAAGAGCAGTGAATTCCTCAAT 1057746 Query 138640 CC-GTGAAGCTTGATTCGTT--CCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTT 138696 || ||| | || | || ||||||| | | ||| ||||||| ||| | || | Sbjct 1057745 CCCGTG---CGTGCCACCTTAGCCTTGAGAGTCTCCCAATCCCACAGGTCGGTGGGAGTG 1057689 Query 138697 TTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCG 138756 ||||| ||||||||||| ||| || ||||| || ||||||| ||| Sbjct 1057688 ACACCCCACAGATCGTACTGTAGTTGTCCTTTTGACGCAGGACTACCCTCGTACGTCTCG 1057629 Query 138757 TATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGT 138815 || || || || | |||| || | |||||||| | ||| | | ||| || || Sbjct 1057628 TA-CGGCCCGTCTGTTTCAGCCATATCACTACTCGCCTCAACCGCGGCGTGGTAGATGGT 1057570 Query 138816 TTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCAT 138875 ||| ||||| || |||||| || ||||||| ||| | ||||| |||||| Sbjct 1057569 CTCGAAGATCTGTTGGTTGAGCCGGCGCGCCTCGGGCGAGTCGAAAGGCATACGGAGCGC 1057510 Query 138876 CGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGA 138935 | |||||| ||| || || || |||||||| || || | ||||| || ||| || || Sbjct 1057509 CATGAACGTGTCAGCGAGACCCTGCACGCCAACACCAATCGGGCGGTGACGCTTGTTGGA 1057450 Query 138936 -CGCTTTTGCGGCTTC---GATAGGATAATAGTTTACATCGATGAT 138977 |||| ||||||| || || || ||||| |||||||||| Sbjct 1057449 CCGCT----CGGCTTCAGGAATTGGGTAGTAGTTGGCATCGATGAT 1057408 >seq25 Length=839721 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||| || || || || | | Sbjct 327076 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTCG 327017 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| || ||| Sbjct 327016 GACACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAA 326957 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || || |||||||| | | | || ||||| ||| Sbjct 326956 CAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTACAAC 326897 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 ||||| |||||| || || || |||||| Sbjct 326896 ATTCAGAAGGAAAGCACTCTCCACCTTGGT 326867 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| ||| | || ||||| || || || ||||| || || | | Sbjct 326792 ATGCAGATTTTCGTTAAGACGTTGACTGGTAAGACGATCACCCTCGAGGTTGAGTCGTCG 326733 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || ||||| || || Sbjct 326732 GACACCATCGACAACGTCAAGGCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAG 326673 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||||| || ||||||||||| | | | || || || || Sbjct 326672 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTTTCCGACTACAAT 326613 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||| |||| ||||| | ||||| || Sbjct 326612 ATCCAGAAGGAGAGCACGCTTCACCTGGTCTTGCGTCTCCGCGGTGG 326566 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||| | ||||| || || || || ||||| || || || || Sbjct 327359 ATGCAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACTCTCGAGGTCGAGTCCTCC 327300 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || ||||| Sbjct 327299 GACACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 327240 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||| ||||||| | | | || || || ||| Sbjct 327239 CAGCGCCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACTCTTTCTGACTACAAC 327180 Query 24884 ATTCAAAAGGA 24894 ||||| ||||| Sbjct 327179 ATTCAGAAGGA 327169 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||| | || || || ||||| || || || || || || || Sbjct 327637 ATGCAGATCTTTGTCAAGACGTTGACGGGGAAGACTATCACCCTTGAGGTGGAGTCCTCC 327578 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || ||||| || |||||||| || Sbjct 327577 GACACCATCGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCTCCCGACCAG 327518 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || || | ||||| || || || ||||| |||||| Sbjct 327517 CAGCGCCTAATCTTCGCGGGCAAGCAGCTCGAGGAT 327482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896885787560