Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 179 6e-39 seq23 95.1 2e-13 seq4 93.3 7e-13 >seq3 Length=2745113 Score = 179 bits (198), Expect = 6e-39 Identities = 243/334 (73%), Gaps = 15/334 (4%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | ||||| || |||||| |||||||| || ||||| Sbjct 2542900 ACCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCAGGCATGAGTCCACGCTT 2542841 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AA 794458 ||||||||| || || | |||| ||| ||||||||||| ||||| |||||||| || Sbjct 2542840 CTTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAAAAAGATACCCTCTACGGCGGCGAA 2542781 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGAT--CCACTTCATCGC 794516 |||| || || ||||| || |||| | | ||||| ||| ||| || || Sbjct 2542780 AGCC-ACAAGACGCTCAGCGAAAG-----AAGAGCTCTTGTCAGATATCCAGCGCAAAGC 2542727 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC--- 794573 ||| |||||||| ||| | | | || | || ||||||||| || ||||| || Sbjct 2542726 CCAGTCTGCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGCGTCGAACAGGTGTTCGCG 2542667 Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633 || |||| |||||||||| ||||||||||| | |||||||||||||| |||||||| Sbjct 2542666 CTGCTCG---GGGTCCTTGATATAGGTGTCGATCAACAGCGAGTAGGTCTCGGAGTGGAT 2542610 Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| || || ||||||||||| || |||||| Sbjct 2542609 GTTCTCCATCATAATCTGGAAGCCGTAGAAGCAG 2542576 Score = 154 bits (170), Expect = 2e-31 Identities = 231/326 (71%), Gaps = 3/326 (1%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| | ||||| || || ||||||||||| ||||||||| Sbjct 2540528 CCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAGCCCGGGCATGAGTCCGCGCTTC 2540587 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| || || | ||| || ||||| |||||||| || || ||||| || Sbjct 2540588 TTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAAGATGCCTTCCACAGCGGCGAAA 2540647 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | ||||||||||| |||| | | | | | | | | | ||||| || |||||| Sbjct 2540648 GCAACGAGCCGCTCCCCAAA--TACCGACGTCTTGTCGGAT-ATCCAGCGCAGCGCCCAG 2540704 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || || || ||| | | | || | | | ||||| | |||||| || |||| Sbjct 2540705 TCGGCTTTCTTCTTGATGCAAGGAATGGAGGTTATGGCATTGAGGAGGTGATCACGCTCG 2540764 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | ||||| |||| ||| ||||||||||| |||||||||||||| ||||||||||| || Sbjct 2540765 TCAGGGTCTTTGATGTATGTGTCGATGAGTAGCGAGTAGGTCTCGGAGTGGATGTTCTCT 2540824 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCA 794666 || ||||||||||| || ||||| Sbjct 2540825 ATCATTATCTGGAAGCCGTAGAAGCA 2540850 Score = 149 bits (164), Expect = 1e-29 Identities = 150/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 793898 CGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 793957 |||||||| || || || ||| |||||| |||||||||||||| | ||||| || Sbjct 2540155 CGCCTTGGAGTAGTCCGAAACACGCTTCTCGAAGAAGTTGGTCTTGCCTTGCAGCGATAT 2540214 Query 793958 CAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGC 794017 | ||||| | ||| ||||| | || |||||||||| | ||||||||| | Sbjct 2540215 GAGGTCCATGAAGTCGAAGGGGTTCGACGAGTTGTAGTGCTTCGGGTTCCCGAGCGAGAC 2540274 Query 794018 AAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGAT 794077 || ||||||||||||||||| || |||||||| |||||||| | ||||||||||||||| Sbjct 2540275 CAGGAGGCGGTCGGCGACGAACTCGATGTACTGACACATGAGCGAGGCGTTCATGCCGAT 2540334 Query 794078 GAGCGCCACGGGCAG 794092 ||||| |||||||| Sbjct 2540335 GAGCGAGACGGGCAG 2540349 Score = 100 bits (110), Expect = 5e-15 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 ||||| ||||| | || || |||||| |||||| ||||| |||||||| | ||| Sbjct 2543272 ACGCCGGCCTTCGAGTAGTCTGAGACGCGCTTCTCGAAGAAGTTCGTCTTGCCTTGCAGC 2543213 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGC 794012 ||||||| ||||| | ||| ||||| | || |||| ||| | ||||| Sbjct 2543212 GAGATCATATCCATAAAGTCGAAAGGGTTCGTCGCGTTGTAGATCTTAGGGTTACCGAGG 2543153 Query 794013 GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATG 794072 | | | ||| || ||||| ||||| || ||||||||||||||||| | ||||||||| Sbjct 2543152 GCAACCACCAGACGATCGGCAACGAACTCGATGTACTGGCACATGAGCGTCGCGTTCATG 2543093 Query 794073 CCGATGAG 794080 || ||||| Sbjct 2543092 CCAATGAG 2543085 >seq23 Length=1066478 Score = 95.1 bits (104), Expect = 2e-13 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 1485474 CTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGAT 1485533 ||||||||||| ||||| |||||||||| ||||||| | || || || ||| | | ||| Sbjct 484133 CTTGGTGACGGATTTGGTGCCCTCTGAGATGGCGTGCTTCGCAAGCTCTCCGGGGAGGAT 484192 Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||||||||| || |||||||||||||| Sbjct 484193 CAGGCGCACAGCAGTCTGGATCTCGCG 484219 >seq4 Length=2243620 Score = 93.3 bits (102), Expect = 7e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||| || |||| || || | || |||||||| |||||||||| ||| | ||||| Sbjct 394081 GCCTCCGTCGCGATCCGCTCAAAGATATCGTTGACGAACGAGTTCAGGATGGCCATCGCC 394022 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||||| ||| ||| |||||||||||||||||||| Sbjct 394021 TTGTTCGAGATACCCGTGTCAGGGTGCACCTGCTTGAGCAC 393981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916232890430753