Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 seq25 107 1e-18 >seq1 Length=3640883 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||| |||||||||||||| || || || | ||| | || |||| Sbjct 1685308 AGGTGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCAAC 1685249 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 |||||||| |||||||| || || ||||| || | || | || |||||||| | || Sbjct 1685248 TGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATC 1685189 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 ||| || ||| | || | || | |||||| || | ||| || ||||| ||| Sbjct 1685188 TTTGCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCCCC 1685129 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| |||||||||||||| Sbjct 1685128 GTCAGCGTCTTCACAAAGATCTGCAT 1685103 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||||||||| ||||| || ||| |||| | || Sbjct 1684296 AGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1684237 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| || || |||||||| | || | |||||||| || Sbjct 1684236 TCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCC 1684177 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || ||| | || | || | |||||| |||| || || ||| Sbjct 1684176 TGAATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTC 1684117 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||| |||||||||||||| Sbjct 1684116 TTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || ||||| | | || |||| |||| ||||| || ||||| Sbjct 1684504 CTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAACTGCTTCCCAGCGAA 1684445 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || |||||||| || | || | |||||||| || | || || ||||||| Sbjct 1684444 GATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATCTTGGCTTTGACGTT 1684385 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| || ||| || || | || || ||||||||||| | ||||| || Sbjct 1684384 ATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCCGTCAAAGTCTTGAC 1684325 Query 34966 AAAGATCTGCAT 34977 || |||||||| Sbjct 1684324 GAAAATCTGCAT 1684313 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || || || | || |||| || ||||||||||| ||||| Sbjct 1684785 CTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCTCGAGTTGCTTTCCAGCGAA 1684726 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| | || | ||||||||||| | || ||| || ||| Sbjct 1684725 AATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCACGTT 1684666 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| | ||||| |||| || || ||||| || || | ||||| || Sbjct 1684665 GTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTGCCAGTCAAAGTCTTCAC 1684606 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 1684605 AAAAATTTGCAT 1684594 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||||||||| ||||||||||| || |||| | || Sbjct 3580732 AGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTATAGTCGCTCAGCGTGCGACCGTCC 3580791 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || |||||||||||||||||||| || ||||| || Sbjct 3580792 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATC 3580829 >seq25 Length=839721 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||||||||||| |||||||||||||| || || ||||| || || | || | || Sbjct 326580 CAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGACCGTC 326639 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| ||||| |||||||| || |||||||| | || | |||||||| || Sbjct 326640 CTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATC 326699 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | ||| || || | ||| || || Sbjct 326700 CTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATCGT 326759 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || | ||||| || || ||||||||| Sbjct 326760 CTTACCAGTCAACGTCTTAACGAAAATCTGCATG 326793 Score = 107 bits (118), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | ||||| |||||||||||||| || || || || |||| |||| |||| | Sbjct 326871 AGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAAT 326930 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || ||||| || || || ||||| | || | ||||||||||| | || Sbjct 326931 TGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 326990 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || || || | ||||||| || | ||| || |||| || || ||||| Sbjct 326991 TTCGCCTTCAC----GTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTT 327046 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| |||||||| || ||||||||||| Sbjct 327047 GCCCGTCAGGGTCTTGACGAAGATCTGCAT 327076 Score = 105 bits (116), Expect = 4e-18 Identities = 146/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840 |||||||||||||| || || ||||| || || |||| |||| || || ||||| || Sbjct 327441 GTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCC 327500 Query 34841 GCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTG 34900 |||||||| || || |||||||| | || | || ||||| || | || || ||| Sbjct 327501 GCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAATCTTCGCCTTG 327560 Query 34901 ACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAG 34956 || || | ||||| || || ||| || |||| ||| || ||||| ||||| | Sbjct 327561 AC--AT--TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCCCCGTCAA 327616 Query 34957 GGTCTTTACAAAGATCTGCATG 34978 ||||| ||||||||||||||| Sbjct 327617 CGTCTTGACAAAGATCTGCATG 327638 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || || | ||| ||||||||||||||||| ||||| || || | || | || |||| Sbjct 327154 AGATGGAGGGTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAAC 327213 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 |||||||| ||||| ||||| || ||||| || | || | ||||||||||| | || Sbjct 327214 TGCTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATC 327273 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || || || || | ||||| || || |||||| || | || |||||||| Sbjct 327274 TTCGCCTTCAC--AT--TGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTT 327329 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| |||||||||||||| Sbjct 327330 CCCGGTCAACGTCTTGACAAAGATCTGCAT 327359 Score = 82.4 bits (90), Expect = 5e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840 |||||||||||||| || || |||||||| || |||| | || || |||||||| || Sbjct 327727 GTGCTCTCCTTCTGGATATTGTAGTCCGAGAGAGTGCGGCCGTCCTCGAGTTGCTTACCA 327786 Query 34841 GCGAAGATCAGTCGTTGCTGGTC 34863 ||||||||||| || |||||||| Sbjct 327787 GCGAAGATCAGGCGCTGCTGGTC 327809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692295888613