Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 >seq1 Length=3640883 Score = 129 bits (142), Expect = 5e-25 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 29577 CACCAA-ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCAT 29635 |||||| |||||| || || || || || ||||| ||||| | || || ||| ||| | Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCT 1684745 Query 29636 CGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTT 29695 ||||||| || ||||| | |||| | ||||| || || ||||||||||| ||||| | Sbjct 1684744 CGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 1684685 Query 29696 GTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 | | ||| || || | || | ||||||||| ||| || |||||||| ||||| | Sbjct 1684684 GGATCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCT 1684625 Query 29756 TGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| || || || ||||| || ||||| Sbjct 1684624 TGCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218603752907