Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq18 105 5e-17 seq15 98.7 7e-15 >seq18 Length=715188 Score = 105 bits (116), Expect = 5e-17 Identities = 207/302 (69%), Gaps = 7/302 (2%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || || || ||||| ||||| ||||| ||||| | ||| | || | ||||| | || Sbjct 271686 ACTAGGCGGTTATCGAAATCCTCACCGCCCAAGTGAGTGTCACCGGCGGTAGCCTTGACC 271745 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || || |||| | || || | ||||| || || || || | ||| Sbjct 271746 TCGAAGATGCCCTCCTCAATGGTCAGCAGCGACACATCGAAAGTGCCTCCTCCAAGATCG 271805 Query 282302 AAAATAAGTACATTCATTTCTTTGTCT-TGGT--TTTTATCAAGACCATACGCAAAAGCA 282358 || ||||| |||||| || | | |||| |||| || ||||| || || | |||| Sbjct 271806 AATATAAGGACATTCCGCTC---GCCAGTGGTCTTTTTGTCGAGACCGTAGGCGATAGCA 271862 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 |||||||| || || || || || | | || || || |||| || |||| ||||| Sbjct 271863 GCAGCAGTAGGCTCGTTGATGATACGGAGTACGTTCAGTCCAGAGATCGTTCCGGCATCC 271922 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || || || | ||| || ||||| || || |||||||| |||| ||| || | |||| Sbjct 271923 TTCGTCGCCTGACGTTGCGAGTCGTTGAAGTAAGCAGGAACGGTAACAACAGCGT-TGTT 271981 Query 282479 AC 282480 || Sbjct 271982 AC 271983 >seq15 Length=1308937 Score = 98.7 bits (108), Expect = 7e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282337 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 282396 |||||||||||| || | ||| || ||||| || || || || | | ||| |||| ||| Sbjct 754525 ATCAAGACCATATGCGAGAGCGGCCGCAGTGGGCTCGTTGATCACCCGCAAGACATCAAG 754466 Query 282397 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 282456 ||| |||||| | ||||||||||| || ||||| | ||| | ||| || || || ||||| Sbjct 754465 ACCGGCAATTGTACCTGCATCTTTGGTCGCTTGCCGTTGCGCATCATTGAAGTACGCAGG 754406 Query 282457 AACAGTAATAACGGCAT 282473 ||||| | || |||| Sbjct 754405 GACAGTGACGACAGCAT 754389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740624164836702