Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 125 7e-24 seq25 122 8e-23 seq1 107 2e-18 seq6 102 8e-17 seq3 89.7 5e-13 >seq11 Length=1765784 Score = 125 bits (138), Expect = 7e-24 Identities = 415/634 (65%), Gaps = 20/634 (3%) Strand=Plus/Minus Query 148308 CTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGC 148367 ||||| | || || || |||| || |||||||||||| || | || |||||| Sbjct 1057835 CTCGTGTAGGGCTCGAAGCACTCATTAAAGCCCAAAATCTGACTCGTTGAAGCGGTGGGC 1057776 Query 148368 ATGTACGCTACCAGCAGCGAGTTGCGCAA-ACCGCGATTTTTTATTTTGCGCTTCAGAGC 148426 ||| |||| ||||| || || | ||| ||| | | || || ||| |||| Sbjct 1057775 ATGGGGGCTAAGAGCAGTGAATTCCTCAATCCCGTGCGTGCCACCTTAGC-CTTGAGAGT 1057717 Query 148427 CGCCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCG 148484 | |||| ||||| || ||| | || || || ||||| |||||||| || || Sbjct 1057716 CTCCCAATCCCACAGGTCGGTG--GGAGTGACACCCCACAGATCGTACTGTAGTTGTCCT 1057659 Query 148485 CGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAG 148544 || || || |||||||||| |||||| |||| | | |||| || | Sbjct 1057658 TTTGACGCAGGACTACCCTCGTACGTCTCGTACGGCCCGTCTGTTTCAGCCATATCACTA 1057599 Query 148545 CTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCC 148604 |||||||| | |||| ||| ||| || |||||| || || ||||||| || || | Sbjct 1057598 CTCGCCTCAACCGCGGCGTGGTAGATGGTCTCGAAGATCTGTTGGTTGAGC--CGGCG-C 1057542 Query 148605 GACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACG 148661 | |||| ||| | |||||||| ||| || |||| ||| || || ||||| ||| Sbjct 1057541 GCCTCGGGCGAGTCGAAAGGCATACGGAGCGCCATGAACGTGTCAGCGAGACCCTGCACG 1057482 Query 148662 CCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTG 148720 || || ||||| || ||||| ||||||| || || || | | || |||| Sbjct 1057481 CCAACACCAATCGGGCGGTGACGCTTGTTGGA-CCGCTCGGCTTCAGGAATTGGGTAGTA 1057423 Query 148721 GTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAA 148780 |||| ||||||||| || ||| ||| | | || ||||||| || | ||| | Sbjct 1057422 GTTGGCATCGATGATCCGGTTAAGGTTGAACGCAACAACCTTTGCAACGTCGTGCAACTT 1057363 Query 148781 TTCAAAATCGTACTTG---TCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATT 148837 || |||| || || || ||||||| | | || | ||||| ||||| || || Sbjct 1057362 TTGGAAATTATATCTGCCCTCCTCTACGAAGGAGGGG---AGAGCGATGGAGGCGAGGTT 1057306 Query 148838 GCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCA 148897 ||| || || |||||||| || | | |||||| | |||||| | ||| |||||| | | Sbjct 1057305 GCAGACAGCAGTCTCATCTGGTGAGGAGTACTCGATGATCTCTGTGCAAAGATTGGAGGA 1057246 Query 148898 TTTGATCACGCCCACGTTCTTTTGATTGCTCTTG 148931 ||||| ||| | |||| || ||| |||| Sbjct 1057245 CTTGATAGTGCCGAGATTCTGCTGGTTGGACTTG 1057212 >seq25 Length=839721 Score = 122 bits (134), Expect = 8e-23 Identities = 145/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| |||||||| || | ||| | | | ||||||||||||||||||||| Sbjct 327446 CTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCA-TCCTCGAGCTGCTTGCCCGCGA 327504 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || ||||||||||||||||| ||||||||||| || ||||| ||||| | Sbjct 327505 AGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAATCTTCGCCTTGACAT 327564 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||||| || |||||| || | ||||| || || || |||| || || | Sbjct 327565 TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTTGA 327624 Query 133648 CGAAAATCTGCATG 133661 | || ||||||||| Sbjct 327625 CAAAGATCTGCATG 327638 Score = 113 bits (124), Expect = 4e-20 Identities = 143/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGCCCGCG 133526 ||| ||||| |||||||| ||| | ||| |||| |||||| ||||||||||| || Sbjct 326601 CTCCTTCTGGATATTGTAGTCGGAAAGCGT--ACGACCGTCCTCCAGCTGCTTGCCGGCA 326658 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | || || ||||||||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 326659 AAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTGACG 326718 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | || | ||||| | | ||| || |||| ||||| || || || |||| || || Sbjct 326719 TTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTTACCAGTCAACGTCTTA 326778 Query 133647 ACGAAAATCTGCATG 133661 ||||||||||||||| Sbjct 326779 ACGAAAATCTGCATG 326793 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 || ||||| || |||||||| | |||| ||| | ||||| | |||||||| || | Sbjct 326886 TCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCA-TCCTCCAATTGCTTGCCAGCAAA 326944 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||||| ||||| ||||| ||||||||||| |||||||| ||||| ||| | | Sbjct 326945 GATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTT 327004 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | ||||| | | ||| || || | || | || ||||| ||||| || || || Sbjct 327005 ATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTCTTGAC 327064 Query 133649 GAAAATCTGCAT 133660 ||| |||||||| Sbjct 327065 GAAGATCTGCAT 327076 >seq1 Length=3640883 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||||||||| || || |||||| | ||| | |||||| | |||||| || ||| | Sbjct 1685294 CTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCAACTGCTTTCCAGCGAA 1685235 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||||| |||||||| || ||||| |||||||||||||| ||||||| ||| | | Sbjct 1685234 GATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACGTT 1685175 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| || || | | ||| || || | ||||| || || || ||||| || || || Sbjct 1685174 GTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCCCCGTCAGCGTCTTCAC 1685115 Query 133649 GAAAATCTGCAT 133660 || |||||||| Sbjct 1685114 AAAGATCTGCAT 1685103 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| ||||| ||||| | || |||| |||||||||||| |||| Sbjct 1685071 GTAGACTCCTTCTGAATATTATAATCAGAAAGAGT--ACGACCGTCCTCGAGCTGTTTGC 1685014 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| || || ||||||||||| |||||||| |||||| || Sbjct 1685013 CGGCGAAGATCAGGCGCTGTTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCT 1684954 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | ||| || |||| |||| ||||| || |||| | Sbjct 1684953 TGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATCGTTTTCCCTGTCAAGG 1684894 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 1684893 TCTTCACAAAGATTTGCAT 1684875 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| || ||| ||| | || || | |||||| || Sbjct 1684509 GTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCA-TCTTCCAACTGCTTCCC 1684451 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || ||||| || || || ||||| ||||| || |||||| || Sbjct 1684450 AGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATCTTGGCTTT 1684391 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | || |||||| || | |||| || || || |||| ||| Sbjct 1684390 GACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCCGTCAAAGT 1684331 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 1684330 CTTGACGAAAATCTGCAT 1684313 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || ||||| ||||| || |||||||| | ||| |||| |||||||| ||||| | Sbjct 1684790 GTAGACTCCTTCTGGATGTTGTAATCAGAAA--GTGTACGACCATCCTCGAGTTGCTTTC 1684733 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || ||||||||||| ||||| || || |||||||| ||||||| || Sbjct 1684732 CAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCT 1684673 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | || || || | |||| || ||||| |||| || Sbjct 1684672 TCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTGCCAGTCAAAG 1684613 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || ||||| ||||| Sbjct 1684612 TCTTCACAAAAATTTGCAT 1684594 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || ||||| ||| | ||| |||||||||||| Sbjct 1684288 ATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 1684229 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | ||||| |||||||||||||||||||| || ||||| || ||||| Sbjct 1684228 CTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTT 1684169 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | ||| | | || | ||||||| | ||| || || | || | || || || || Sbjct 1684168 TGCCTTCACGTTGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTCTTCCCCGT 1684109 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || |||||||| Sbjct 1684108 AAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 82.4 bits (90), Expect = 7e-11 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || || || |||| || |||| ||| |||||| || Sbjct 3580738 AAGTGAAGGGTAGACTCCTTCTGGATGTTATAGTCGCTCAGCGTGCGACC-GTCCTCAAG 3580796 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 |||||| || ||| | || || |||||||| ||||||||||||| Sbjct 3580797 CTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGAGGGATGC 3580840 >seq6 Length=2010026 Score = 102 bits (112), Expect = 8e-17 Identities = 84/100 (84%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || |||||||||| || ||| ||| | |||||||||| Sbjct 1330056 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGCTCAAAGTGCGACCA-TCCTCGAGCT 1330114 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGAT 133555 ||||||| ||| | ||||| ||||| |||||||||||||| Sbjct 1330115 GCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGGAT 1330154 >seq3 Length=2745113 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || ||||| ||||| || |||| |||||||||||| || |||||||| |||||| Sbjct 2540504 AGACACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTC 2540563 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 || |||||||||| || | |||||| ||||||| | || ||| || || ||| Sbjct 2540564 AGCCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAG 2540623 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 || | ||| ||||| ||| || || || | ||||| | || || ||||||| | Sbjct 2540624 AAGATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAATACCGACGTCTTGTCG 2540683 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851 ||||| || ||||| ||||| || || Sbjct 2540684 GATATCCAGCGCAGCGCCCAGTCGGCTTTCTT 2540715 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 120363 GACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAA 120422 |||||| ||||| || ||||| || ||||| | || ||| || | | |||||| ||||| Sbjct 2543249 GACGCGCTTCTCGAAGAAGTTCGTCTTGCCTTGCAGCGAGATCATATCCATAAAGTCGAA 2543190 Query 120423 CGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTAC 120482 ||||| ||||||| || || || | || | || | ||| || || || || Sbjct 2543189 AGGGTTCGTCGCGTTGTAGATCTTAGGGTTACCGAGGGCAACCACCAGACGATCGGCAAC 2543130 Query 120483 AAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCC 120521 ||||| ||||||| ||||||| | |||||||||||| Sbjct 2543129 GAACTCGATGTACTGGCACATGAGCGTCGCGTTCATGCC 2543091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420032569480