Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq25 122 6e-23 seq1 96.9 2e-15 >seq25 Length=839721 Score = 122 bits (134), Expect = 6e-23 Identities = 152/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || || ||||| || || |||||||| || || || || || |||| ||||| || Sbjct 327156 ATGGAGGGTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTG 327215 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||||| || ||||||| ||||||||||| | || | ||| || ||||| ||| || Sbjct 327216 CTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTT 327275 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | ||| |||| ||| | ||||||| || || || || | ||||| || || || | Sbjct 327276 CGCCTTC-ACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGG 327334 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | ||||| || ||||||||||||||| Sbjct 327335 TCAACGTCTTGACAAAGATCTGCATA 327360 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||||| || || || ||||||||||| ||||| ||||| | || |||||||| Sbjct 326874 TGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGC 326933 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || ||||| || | |||||| || || | || | || || ||||| ||| ||| Sbjct 326934 TTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTC 326993 Query 33667 TGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTT 33726 |||| || | |||||| || || || |||| || ||||| || || || Sbjct 326994 GCCTTCACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTC 327053 Query 33727 AACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 327054 AGGGTCTTGACGAAGATCTGCAT 327076 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 33541 ACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| | |||||||| || || || ||||| || || || ||||| | || || Sbjct 327428 ACCAAGATGCAACGTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTC 327487 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || || || || || || | |||||||| || | || | ||||| || || Sbjct 327488 GAGCTGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTG 327547 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| ||| || | ||| ||| | ||||||| || ||||| |||| ||||| || | Sbjct 327548 AATCTTCGCCTTGA-CATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCT 327606 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || ||||| || |||||||||||||| Sbjct 327607 TCCCCGTCAACGTCTTGACAAAGATCTGCAT 327637 >seq1 Length=3640883 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 33540 CACCAAA-TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| || || || |||||||| || ||||| ||||||||||| || || |||| | Sbjct 1685313 CACCAAGGTGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCT 1685254 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 |||| || ||||| || || || | |||||||||||| | || | ||||| ||||| Sbjct 1685253 CCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCT 1685194 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 || || || | || | ||| | || || || || || || | ||||| || Sbjct 1685193 GGATCTT-TGCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTC 1685135 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || | ||| || |||||||||||||| Sbjct 1685134 TTCCCCGTCAGCGTCTTCACAAAGATCTGCAT 1685103 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || | || ||| | || | ||| || || ||| || || |||||||| ||||| Sbjct 1684312 ACCGCCACGCAGACGAAGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGA 1684253 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || ||||| || | |||||||| || | || Sbjct 1684252 GAGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGG 1684193 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || || || ||| || |||| | | ||| | |||||| ||| || | Sbjct 1684192 GATACCCTCCTTATCCTGAATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGATGACTCGA 1684134 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||| ||||| || || || | || || ||||||||||||||| Sbjct 1684133 CTTCAAGCGTAATCGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCATA 1684084 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | ||| ||||| ||| || || || || ||||| || Sbjct 1685101 CCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGAA 1685042 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| || | ||||| ||||| || |||| ||||| ||||| | || Sbjct 1685041 AGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGGG 1684982 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || ||| || | | | ||| | ||||||| || || || Sbjct 1684981 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAAGACTCGAC 1684923 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||||||||| ||||| || || || |||||||| |||||| Sbjct 1684922 CTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCATA 1684874 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/213 (70%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 33540 CACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| ||| ||||| ||| || || ||||||||||| || ||||| || | || | Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCT 1684745 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 | | ||| ||||| || ||||||| |||||||| || | || | ||| || ||||| Sbjct 1684744 CGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 1684685 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 || || || | || | ||| | ||||| ||||| || |||| ||||| || Sbjct 1684684 GGATCTT-TGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTC 1684626 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || || || ||||| || |||||| Sbjct 1684625 TTGCCAGTCAAAGTCTTCACAAAAATTTGCATA 1684593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703491227840