Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-19 >seq1 Length=3640883 Score = 113 bits (124), Expect = 1e-19 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || ||||| |||||||| |||| ||||| |||||| Sbjct 1684316 CAGATTTTCGTCAAGACTTTGACGGGAAAGACGATCACGCTGGAGGTGGAGTCCTCTGAC 1684375 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| || ||| ||||| || || || ||| || || || Sbjct 1684376 ACAATTGATAACGTCAAAGCCAA-GATCCAAGATAAGGAGGGCATTCCCCCTGATCAGCA 1684434 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | || |||||||| || ||||||||||||||||| |||| ||| | ||||||||| | Sbjct 1684435 ACGTCTCATCTTCGCTGGGAAGCAGTTGGAAGATGGTCGGACGTTGTCGGATTACAACAT 1684494 Query 206352 CCAGAAAGAGTCTACTCTTCACCT 206375 ||||| ||||| || ||||| || Sbjct 1684495 TCAGAAGGAGTCGACACTTCATCT 1684518 Score = 100 bits (110), Expect = 7e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || ||||| || || || || ||||| ||||| || || || || Sbjct 1685106 CAGATCTTTGTGAAGACGCTGACGGGGAAGACTATCACCTTGGAGGTCGAGTCGTCGGAT 1685165 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| |||||| || || || ||||| ||| ||||| || Sbjct 1685166 ACAATTGACAACGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAG 1685225 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| |||||||||||||| || || | || | ||||||| ||| | Sbjct 1685226 CGTCTCATCTTCGCTGGAAAGCAGTTGGAGGACGGGCGTACGCTCTCCGATTATAACATT 1685285 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||||||| ||| |||||||||| Sbjct 1685286 CAGAAAGAGAGTACCCTTCACCTTG 1685310 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| | || || ||| |||||||||| |||| || ||| | Sbjct 1684618 ACTGGCAAGACTATCACTCTTGAGGTCGAATCTTCTGACACAATCGACAACGTGAAGGCA 1684677 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || || ||| || ||| || | || || ||||| |||||| Sbjct 1684678 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCCTGATTTTCGCTGGAAAG 1684737 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | || ||||| | || | | ||||||||| ||||||| |||||||||||||| Sbjct 1684738 CAACTCGAGGATGGTCGTACACTTTCTGATTACAACATCCAGAAGGAGTCTACTCTTCAT 1684797 Query 206374 CTTG 206377 |||| Sbjct 1684798 CTTG 1684801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818876955967