Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 5e-13 seq25 82.4 7e-11 >seq1 Length=3640883 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||| | ||| | | | ||||| || ||||||||||||||| | ||| Sbjct 1684306 ACGCAGACGAAGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 1684247 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || || |||||||| || || | | |||| || ||||| || || ||||| || || Sbjct 1684246 GCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACC 1684187 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || ||||| ||| ||| |||| | || | || |||| | ||| ||||| | Sbjct 1684186 CTCCTTATCCTGAATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTCGACTTCAAG 1684127 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | ||| || || || || || || | || |||||||| Sbjct 1684126 CGTAATCGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 >seq25 Length=839721 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || || ||||||||| | ||||| || || ||||| || |||| | | Sbjct 326601 CTCCTTCTGGATATTGTAGTCGGAAAGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAA 326660 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||| || ||||| || || ||||| ||||| || ||||| ||| || || | | Sbjct 326661 GATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTGACGTT 326720 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || || | || ||| || |||| || | ||| |||||||||| || || | Sbjct 326721 GTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTTACCAGTCAACGTCTTAAC 326780 Query 132112 GAAAATCTGCATG 132124 ||||||||||||| Sbjct 326781 GAAAATCTGCATG 326793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610443379720