Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 208 1e-47 seq19 87.8 3e-11 >seq3 Length=2745113 Score = 208 bits (230), Expect = 1e-47 Identities = 382/546 (70%), Gaps = 23/546 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || ||||| ||||| || |||||| | || | Sbjct 2542363 GATTTGGAACATGTAC-AAGAAGGCGGAAGCTTCCTTCTGGACTGCAGAGGAGATGGATC 2542421 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTG--TCG-CTGAGCGACGACGAGCGCCATTTCATCA 1455891 || | || | | | ||||| ||| || | | |||||||||| ||||||| Sbjct 2542422 TCTCCAAGGATATGCACGACTGGAACAATCGTCTCAATGCCGACGAGCGCTTTTTCATCT 2542481 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 || |||||||| |||||| ||||| || || ||||| |||||||| | || Sbjct 2542482 CCCATGTCCTCGCGTTTTTT-GCCGCGTCGGACGGTATCGTCAATGAGAACCTTGTCGAG 2542540 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || || ||||| || | |||||||| | || ||||| |||||||| Sbjct 2542541 CGTTTCTCCAACGAGGTTCAGGCCGCTGAGGCACGCTGCTTCTACGGCTTCCAGATTATG 2542600 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || ||||||||||| ||||||||||||| |||||||||| Sbjct 2542601 ATGGAGAACATCCACTCCGAGACCTACTCGCTGTTGATCGACACCTATATCAAGGACCC- 2542659 Query 1456072 GTCGAGAAG---GACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 |||| || || ||||| || ||||||||| || | || | | | ||| ||| Sbjct 2542660 --CGAGCAGCGCGAACACCTGTTCGACGCCATCGAGACTATCCCTTGCATCAAGAAGAAG 2542717 Query 1456129 GCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 || |||||||| || ||||| |||| ||| | || || || ||||| | Sbjct 2542718 GCAGACTGGGCTTTGCGCTGGATATCTGACAA-GAGCTCTTC----TTTCGCTGAGCGTC 2542772 Query 1456186 TCGTCGGCTTT-GCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTT 1456243 | || |||||| |||| ||| ||||| ||||||||||| ||| |||| | || || Sbjct 2542773 TTGT-GGCTTTCGCCGCCGTAGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTC 2542831 Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCG 1456303 |||||||||||||| || |||||||| || || | | | | ||||| | ||||| || Sbjct 2542832 TGGCTCAAGAAGCGTGGACTCATGCCTGGCCTCACGTTCTCG-AACGAGCTCATCAGCCG 2542890 Query 1456304 CGACGA 1456309 ||||| Sbjct 2542891 TGACGA 2542896 Score = 185 bits (204), Expect = 1e-40 Identities = 311/441 (71%), Gaps = 13/441 (3%) Strand=Plus/Minus Query 1455874 ACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTG 1455933 ||||||| | |||||| | | ||| | || ||| ||||||||| ||| ||||| ||| Sbjct 2540963 ACGAGCGGTACTTCATCTCGAATGTCTTAGC-TTTCTTCGCCGCCTCCGACGGCATAGTG 2540905 Query 1455934 GCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTT 1455993 ||| || || | || ||||| || ||||| ||| | |||||| | | || Sbjct 2540904 AACGAAAATCTCGTCGAGCGCTTCTCTAACGAGGTTCAAGCTGCTGAGGCAAGATGCTTC 2540845 Query 1455994 TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGAC 1456053 ||||| |||||||| || || ||||||||||| || ||||||||||| || |||||| Sbjct 2540844 TACGGCTTCCAGATAATGATAGAGAACATCCACTCCGAGACCTACTCGCTACTCATCGAC 2540785 Query 1456054 ACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCG 1456113 || ||| |||| ||||| | |||| || |||||| | ||||| | | | || Sbjct 2540784 ACATACATCAAAGACCCTGACGAGCGTGATCACCTCCTCAATGCCATAACCTCCATTCCT 2540725 Query 1456114 TCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGAC 1456170 | | | ||| || |||||||||||| || ||||| | |||| | | ||| Sbjct 2540724 TGCATCAAGAAGAAAGCCGACTGGGCGCTGCGCTGGATATCCGACAA----GACGTCGGT 2540669 Query 1456171 ACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTT 1456229 | |||| ||||||||||| | || ||||| || || |||||||| ||||| || | Sbjct 2540668 A-TTTGGGGAGCGGCTCGTTGCTTTCGCCGCTGTGGAAGGCATCTTCTTCTCCGGATCCT 2540610 Query 1456230 TCTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAA 1456288 || ||| | || || ||||||||||||||||| ||||||||||| || | || || Sbjct 2540609 TC-GCGTCAATATTCTGGCTCAAGAAGCGCGGACTCATGCCCGGGCTGACG-TTCTCTAA 2540552 Query 1456289 CGAATTTATCAGTCGCGACGA 1456309 ||| | ||||| |||||||| Sbjct 2540551 CGAGCTCATCAGCCGCGACGA 2540531 Score = 116 bits (128), Expect = 5e-20 Identities = 147/197 (75%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 ||||| || |||||||||||||||||||| | ||||||||| |||||||| || || | Sbjct 2540349 CTGCCCGTCTCGCTCATCGGCATGAACGCCTC-GCTCATGTGTCAGTACATCGAGTTC-G 2540292 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690 ||||||||||||| || | ||||||| | |||||||||| || | ||||| Sbjct 2540291 TCGCCGACCGCCTCCTGGTCTCGCTCGGGAACCC-GAAGCACTACAACTCGTCGAACCCC 2540233 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTG 1456750 ||| | ||||| | || ||||| | |||||||||||||| |||||| || || Sbjct 2540232 TTCGACTTCATGGACCTCATATCGCTGCAAGGCAAGACCAACTTCTTCGAGAAGCGTGTT 2540173 Query 1456751 GC-GAGTACGCCAAGGC 1456766 | || ||| ||||||| Sbjct 2540172 TCGGACTACTCCAAGGC 2540156 Score = 98.7 bits (108), Expect = 1e-14 Identities = 143/197 (73%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||||| ||||||||||| || |||||||||||||||||| | | || || ||||| || | Sbjct 2543085 CTCATTGGCATGAACGCGAC-GCTCATGTGCCAGTACATCG-AGTTCGTTGCCGATCGTC 2543142 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 || | | || ||||| | ||| |||| || | ||||| ||| | ||| Sbjct 2543143 TGGTGGTTGCCCTCGG-TAACCCTAAGATCTACAACGCGACGAACCCTTTCGACTTTATG 2543201 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCC 1456761 || |||||||||| | |||||||| ||||| |||||| ||||| | || ||| | Sbjct 2543202 GATATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGTCTCAGACTACTCG 2543261 Query 1456762 AAGGCCGGCGTCACCGC 1456778 ||||||||||| | ||| Sbjct 2543262 AAGGCCGGCGTGAACGC 2543278 >seq19 Length=1138767 Score = 87.8 bits (96), Expect = 3e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||||| ||| |||||||||| |||| |||||||| || ||| |||||||||||| Sbjct 908341 GCGGACCTCGTCTCGTGGGGCGCGATCGGCGCGCGCACGACGGAGTCGCAGGTGCACCGC 908282 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTG 165869 ||| | |||| ||||| || |||| | |||||||| ||| ||| || || | ||| Sbjct 908281 GAGCTCACGTCTGCGCTCTCGATGCCGACGGGCTTCAAGAACTCCACGGATGGTACTGTG 908222 Query 165870 G 165870 | Sbjct 908221 G 908221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177798950616574