Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq25 134 1e-26 seq1 120 3e-22 >seq25 Length=839721 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | ||| |||| || | ||| |||||||| || || ||||| |||| Sbjct 326566 CCACCGCGGAGACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAA 326625 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| ||||||||||| || ||||| |||| ||||||||||||| |||| Sbjct 326626 AGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 326685 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||| ||| ||||| ||| | |||| | | ||||| ||| || || Sbjct 326686 ATGCCCTCCTTATCCTGAATCTTCGCCTTGA-CGTTGTCGATGGTGTCCGACGACTCAAC 326744 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||||| ||||| ||||| || || || || |||||||| Sbjct 326745 CTCGAGGGTGATCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Score = 114 bits (126), Expect = 1e-20 Identities = 152/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 35528 ACCAA-ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| ||| ||||| |||||||| || || ||||| || | | || || | || || Sbjct 327428 ACCAAGATGCAACGTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTC 327487 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| ||||| || || | ||||||||||| | ||||| || ||||| ||| Sbjct 327488 GAGCTGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTG 327547 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | | | | | |||||| || |||||||| | ||||| || || Sbjct 327548 AATCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTT 327607 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||| || || ||||| |||||||| Sbjct 327608 CCCCGTCAACGTCTTGACAAAGATCTGCAT 327637 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 ||||||||||| ||||||||||| || | | || || |||| |||| |||||| || Sbjct 327163 GTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCA 327222 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| |||||||| || | || | | |||||||||| ||||| |||| Sbjct 327223 GCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTC 327282 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| || || ||||| | ||||| || || || ||||| || Sbjct 327283 ACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAACGTC 327342 Query 35720 TTCACAAATATCTGCAT 35736 || ||||| |||||||| Sbjct 327343 TTGACAAAGATCTGCAT 327359 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || || ||||| |||||||||||||| | | || || | || |||| ||||| || Sbjct 326880 GTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAATTGCTTGCCA 326939 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | ||||| ||||| | ||| | || |||||||||| ||||| |||| Sbjct 326940 GCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 326999 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | ||||| ||| || ||||| | || ||||| || ||||||| || Sbjct 327000 ACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCCGTCAGGGTC 327059 Query 35720 TTCACAAATATCTGCATTC 35738 || || || |||||||||| Sbjct 327060 TTGACGAAGATCTGCATTC 327078 >seq1 Length=3640883 Score = 120 bits (132), Expect = 3e-22 Identities = 156/212 (74%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 35527 CACCAA-ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGT 35585 |||||| ||| | ||| |||||| || ||||||||||| | | || || | || | Sbjct 1684804 CACCAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCT 1684745 Query 35586 CCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCA 35645 | || ||||| || || || |||| ||||||||||| | ||||| | |||||||||| Sbjct 1684744 CGAGTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCT 1684685 Query 35646 TGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 ||||||| ||||| |||| | | ||||| ||||| ||||| | ||||| || Sbjct 1684684 GGATCTTTGCCTTCA-CGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTC 1684626 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || |||||||| |||||||| || ||||| Sbjct 1684625 TTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | ||| || |||| || |||||||| || ||||| Sbjct 1684276 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAA 1684217 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | |||||| ||| |||||| ||||| || Sbjct 1684216 GATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTTGCCTTCA-CGT 1684158 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || || || | ||| ||||| || ||||| | || || | Sbjct 1684157 TGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTCTTCCCCGTAAGGGTCTTGA 1684098 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 1684097 CAAAGATCTGCAT 1684085 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | ||| || || | || |||| |||||| || || || Sbjct 1684504 CTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAACTGCTTCCCAGCGAA 1684445 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||| || | |||| || |||||| || |||| || |||| || Sbjct 1684444 GATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATC-TTGGCTTTGACGT 1684386 Query 35665 T-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||| || |||||||||| ||||||||| || ||||||||||| || | Sbjct 1684385 TATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCCGTCAAAGTCTTGA 1684326 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 1684325 CGAAAATCTGCAT 1684313 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | || | ||| | ||| |||||| ||||| || ||||| | Sbjct 1685103 TTCCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAG 1685044 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || |||| || ||||| || || || || |||| ||||| || || | || Sbjct 1685043 AAAGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAG 1684984 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCC 35686 | | || |||||||||| |||||| ||| | |||| | | |||||| || || Sbjct 1684983 GGATGCCCTCCTTGTCCTGGATCTTCGCCTTGAC-GTTGTCGATGGTGTCGGAAGACTCG 1684925 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||||||||| || ||||| || |||||||| || ||||| Sbjct 1684924 ACCTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 82.4 bits (90), Expect = 7e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| ||| || || | || ||||||||||| || || || Sbjct 1684048 CTCCTTCTGAATGTTGTAGTCGGACAACGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAA 1683989 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCT 35634 ||||| ||||| ||||| | ||||| ||| Sbjct 1683988 GATCAAGCGCTGTTGGTCAGGAGGAATGCT 1683959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792884365160