Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq25 140 3e-28 seq1 116 4e-21 >seq25 Length=839721 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || ||||| |||||| ||||| || || ||||||||| | Sbjct 326566 CCACCGCGGAGACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAA 326625 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| || ||||| ||||| ||||| |||| |||||||| || || || Sbjct 326626 AGCGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 326685 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | ||||| ||||| || || Sbjct 326686 ATGCCCTCCTTATCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACC 326745 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || || || ||||||||||| ||||| Sbjct 326746 TCGAGGGTGATCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Score = 105 bits (116), Expect = 7e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 134523 TCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||| |||||||||||||| || || || ||| || | ||| || || || ||| Sbjct 327169 TCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCAGCGAAA 327228 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 |||| ||||||||||| || || || || || || || ||||| || || || | Sbjct 327229 ATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTCACATTG 327288 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | |||||||| || || || |||||||| ||||| || ||||| || || || || Sbjct 327289 TCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAACGTCTTGACA 327348 Query 134703 AAAATTTGCAT 134713 || || ||||| Sbjct 327349 AAGATCTGCAT 327359 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||| |||||| ||||||||||| || | ||| || || || | Sbjct 326871 AGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCAAT 326930 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| ||||| || | |||||| || || || || ||||| || || || ||||| Sbjct 326931 TGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 326990 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || || | ||||| ||||| || || || |||||||| || || || Sbjct 326991 TTCGCCTTCACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGCCC 327050 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || || ||||| || |||||| Sbjct 327051 GTCAGGGTCTTGACGAAGATCTGCATT 327077 >seq1 Length=3640883 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || || ||||| ||||||||||||||| | |||| | ||| ||| Sbjct 1684293 ACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 1684234 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| || | |||||||| ||||| || || || || || || ||| Sbjct 1684233 AGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGA 1684174 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| || || ||| | ||||||||| || || || || || ||||| || || Sbjct 1684173 ATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTCTTC 1684114 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || || || || ||||| Sbjct 1684113 CCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || || ||||| ||||| || || || || || || ||| ||| Sbjct 1685083 ACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGAAAGAGTACGACCGTCCTCG 1685024 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||||||||| || || |||| ||||| ||||| || || ||||| || || || || Sbjct 1685023 AGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGGGATGCCCTCCTTGTCCTGG 1684964 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || || || |||||||| || ||||| Sbjct 1684963 ATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATCGTTTTC 1684904 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || |||||||| Sbjct 1684903 CCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 109 bits (120), Expect = 6e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCG 134564 |||| || || || || ||||| ||||||||||| | || |||| || || || || Sbjct 1684520 CGAGATGAAGTGTCGACTCCTTCTGAATGTTGTAATCCGACAAC-GTCCGACCATCTTCC 1684462 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||| || || || || || | ||| |||||||| || || ||||| || || ||||| Sbjct 1684461 AACTGCTTCCCAGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGG 1684402 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| || | |||||| || || ||||| || || || || || || Sbjct 1684401 ATCTTGGCTTTGACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTT 1684342 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || |||||||| ||||| Sbjct 1684341 CCCGTCAAAGTCTTGACGAAAATCTGCAT 1684313 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || || || || ||||| || |||||||| || || || || || ||||| Sbjct 1684799 AGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCTCGAGT 1684740 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || ||||||| |||||||| || || || || || || || || || || Sbjct 1684739 TGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATC 1684680 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 ||| || || ||| | |||||| || ||||| || || ||||| || || || || Sbjct 1684679 TTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTGCCA 1684620 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || ||||||||||| Sbjct 1684619 GTCAAAGTCTTCACAAAAATTTGCAT 1684594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397597680040