Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 165 1e-35 seq11 98.7 1e-15 >seq3 Length=2745113 Score = 165 bits (182), Expect = 1e-35 Identities = 367/548 (67%), Gaps = 6/548 (1%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || |||||||| ||| | |||||| || | || || | |||||||| || || || Sbjct 2540507 CACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAGC 2540566 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || ||||| || || ||||| |||||||| ||||| | || || ||||| || |||||| Sbjct 2540567 CCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAAG 2540626 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA-AC--TTGTATCATTATGT 39793 |||||||| || || || || ||||| || | ||| || | || || | | | Sbjct 2540627 ATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAATACCGACGTCTTGTCGGAT 2540686 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 ||||| | | ||||| || ||||||||||| | ||||| || | ||| ||||| Sbjct 2540687 ATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATGCAAGGAATGGAGGTTATGGCATTG 2540746 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 | ||| | || || ||| ||||| | ||||| || || | || || | Sbjct 2540747 AGGAGGTGATCACGCTCGTCAGGGTCTTTGATGTATGTGTCGATGAGTAGCGAGTAGGTC 2540806 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || |||||||| || ||| ||||| || ||||| || |||||||| |||| | | Sbjct 2540807 TCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCGTAGAAGCATCTTGCCTCAGCAGCT 2540866 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || ||||| | | || | || | | |||||| |||||||| || || ||||| Sbjct 2540867 TGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCGTTCACTATGCCGTCGGAGGCGGCG 2540926 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCCAG 40090 || || || || |||| || || || || | || | | | |||||| Sbjct 2540927 AAGAAAGCTAAGACATTCGAGATGAAGTACCGCTCGTTGGCATTGAGACGGTCGTTCCAG 2540986 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 || ||| ||| | |||| || | ||||| ||||||| || || || ||||| ||| Sbjct 2540987 TCTGTGAGATCATGGGATAGGTCGATCTCTTCTACTGTCCAGAAAGATGCTTCTGCTTTT 2541046 Query 40151 TTGTACAT 40158 |||||||| Sbjct 2541047 TTGTACAT 2541054 >seq11 Length=1765784 Score = 98.7 bits (108), Expect = 1e-15 Identities = 199/291 (68%), Gaps = 7/291 (2%) Strand=Plus/Minus Query 69897 GATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTT 69956 ||| | |||||| ||||| |||||||| || || |||||| || || ||||| Sbjct 1056536 GATCATAGCACAGTTCTTCAAGGTGTCATAGATGCCTTCTATGGAGTCGTCCTTCATGCA 1056477 Query 69957 AAG-AAGAA--AACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 || ||||| | |||| ||||||| | | || |||||||| || | || || Sbjct 1056476 AACCAAGAAGCAGGAGCT---CATTTGAGGGTTGGGGGTACCCGCATTGAAGAGAGTCGG 1056420 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTAT 70073 ||||| |||||||| | || | || | || || || || || || || || || Sbjct 1056419 CGATGCATGAGTGAAGAAGCTT-CGGACATAAGGTTATAGGTCTCGATGGCGCGCTCAAT 1056361 Query 70074 ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGT 70133 ||| | ||||| || | || ||||||||||||||||||||||| ||||| | || Sbjct 1056360 ATCAGAGCCGTGAATACCCACTGCCACACGCATCAACATATGCTGAGGGCGTTCGGCTGT 1056301 Query 70134 TTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAA 70184 | ||| || |||| ||||||||| ||| || || ||||| ||||| Sbjct 1056300 ACGACCATTGATCTTCAGCAGGTATGAGCGTTCAAGTGTCTTAAATCCAAA 1056250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907709532280