Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 >seq3 Length=2745113 Score = 104 bits (114), Expect = 2e-17 Identities = 287/436 (66%), Gaps = 7/436 (2%) Strand=Plus/Minus Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT 43909 || || || || || || || |||||| ||||| || |||||| | || || || Sbjct 2540940 GTCTTAGCTTTCTTCGCCGCCTCCGACGGCATAGTGAACGAAAATCTCGTCGAGCGCTTC 2540881 Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969 | | || |||||| | || ||| |||| || || || || || || ||||| Sbjct 2540880 TCTAACGAGGTTCAAGCTGCTGAGGCAAGATGCTTCTACGGCTTCCAGATAATGATAGAG 2540821 Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAG 44029 || || || || || | ||| || || || || || ||||||||||| ||||| Sbjct 2540820 AACATCCACTCCGAGACCTACTCGCTACTCATCGACACATACATCAAAGACCCTGACGAG 2540761 Query 44030 AAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGG 44089 ||| | | ||||| ||| | | ||| || || | ||||| |||||| Sbjct 2540760 CGTGATCACCTCCTCAATGCCATAACCTCCATTCCTTGCATCAAGAAGAAAGCCGACTGG 2540701 Query 44090 GCCCTTAAATGGATAAATTCAA-ATGAT-TCT---TTTGGAGAACGACTTGTCGCGTTTG 44144 || || |||||| | | | | || || ||||| || || || || || || | Sbjct 2540700 GCGCTGCGCTGGATA--TCCGACAAGACGTCGGTATTTGGGGAGCGGCTCGTTGCTTTCG 2540643 Query 44145 CAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAAC 44204 | | |||||||||||| ||||| || ||||| || ||| | ||||| ||| | ||||| | Sbjct 2540642 CCGCTGTGGAAGGCATCTTCTTCTCCGGATCCTTCGCGTCAATATTCTGGCTCAAGAAGC 2540583 Query 44205 GAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTAC 44264 | || | ||||| ||| ||||||| || || ||| | || || || || || ||| | | Sbjct 2540582 GCGGACTCATGCCCGGGCTGACGTTCTCTAACGAGCTCATCAGCCGCGACGAGGGCATGC 2540523 Query 44265 ATTGCGATTTTGCTTG 44280 || ||| || || || Sbjct 2540522 ATACCGACTTCGCGTG 2540507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455384812635