Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq1 96.9 4e-15 seq11 82.4 9e-11 >seq3 Length=2745113 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 94711 CAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATG 94770 || || || || |||||| | || | || || || | ||||| || || |||||| || Sbjct 2542673 CACCTGTTCGACGCCATCGAGACTATCCCTTGCATCAAGAAGAAGGCAGACTGGGCTTTG 2542732 Query 94771 AAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGT 94829 ||| | | |||| | | ||| || |||||||| || | || || || || Sbjct 2542733 CGCTGGATATCTGACAAGAGCTC-TTCTTTCGCTGAGCGTCTTGTGGCTTTCGCCGCCGT 2542791 Query 94830 TGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCT 94889 ||||||||||| ||||| || || ||| | || | |||||||||||||| || || Sbjct 2542792 AGAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTCTGGCTCAAGAAGCGTGGACT 2542851 Query 94890 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 |||||| || ||| ||||| |||||||| ||| ||||||||||| Sbjct 2542852 CATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGACGAGGG 2542899 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 |||| ||||| ||| | || || || ||| || || ||||||||||| || |||||| Sbjct 2540667 TTTGGGGAGCGGCTCGTTGCTTTCGCCGCTGTGGAAGGCATCTTCTTCTCCGGATCCTTC 2540608 Query 94858 TGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 ||| | || | |||||||||||||| || |||||||| || || ||||| ||||| Sbjct 2540607 -GCGTCAATATTCTGGCTCAAGAAGCGCGGACTCATGCCCGGGCTGACGTTCTCTAACGA 2540549 Query 94917 GCTTATCTCTCGTGACGAGGG 94937 ||| ||| || |||||||| Sbjct 2540548 GCTCATCAGCCGCGACGAGGG 2540528 >seq1 Length=3640883 Score = 96.9 bits (106), Expect = 4e-15 Identities = 142/198 (72%), Gaps = 11/198 (6%) Strand=Plus/Plus Query 169262 TGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTT-----TGATGTGAGCT 169316 || || || ||||| |||||||||| | | || ||| | ||| |||| ||| | Sbjct 412080 TGCTGCAGTCCCAAAATCTTCTTGATGTTCTGGATCTCCTCGTTCTTCATGATCTGATC- 412138 Query 169317 GTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGT 169376 ||| | ||||| || || ||| ||| ||||| ||||||||||| ||||||| Sbjct 412139 GTGCTTC----GCATCTCGCACGTTCAGGAGCTTTCCACGGAGAGGGAAGACGCCGTAGT 412194 Query 169377 GATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGG 169436 ||||||||||| || ||||| ||||| || || || || || || || ||||||| Sbjct 412195 TGTCACGACCAACAACACCCAGACCTGCGACCGCTAGCGTTTTGGCGGAATC-CCCTCGG 412253 Query 169437 TGACGATGAGCGTACATT 169454 | | |||||||||||||| Sbjct 412254 TAAGGATGAGCGTACATT 412271 >seq11 Length=1765784 Score = 82.4 bits (90), Expect = 9e-11 Identities = 176/262 (67%), Gaps = 1/262 (0%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| | ||||| ||||| ||||| | |||||||| || || ||||| | Sbjct 1056312 CCCTCAGCATATGTTGATGCGTGTGGCAGTGGGTATTCACGGCTCTGATATTGAGCGCGC 1056371 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | | ||||| || || |||||| ||| | | |||| ||| ||| | || || ||||| Sbjct 1056372 CATCGAGACCTATAACCTTATGTCCGAAGCT-TCTTCACTCATGCATCGCCGACTCTCTT 1056430 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| ||||| || | || |||||| | |||||| | | || ||||| || Sbjct 1056431 CAATGCGGGTACCCCCAACCCTCAAATGAGCTCCTGCTTCTTGGTTTGCATGAAGGACGA 1056490 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| || | || ||||||| || | | | | ||||| ||| ||| || || Sbjct 1056491 CTCCATAGAAGGCATCTATGACACCTTGAAGAACTGTGCTATGATCAGCAAGACAGCGGG 1056550 Query 104461 GGGTATTGGGATGCACATCCAT 104482 ||||||||| || ||| ||| Sbjct 1056551 CGGTATTGGGTTGAGCATTCAT 1056572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259874073480