Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 156 1e-32 seq25 134 4e-26 seq18 118 3e-21 seq4 87.8 5e-12 >seq1 Length=3640883 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | ||||| |||||||| |||||||| || ||||| || || || Sbjct 1684315 CATACCGCCACGCAGACGAAGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTC 1684256 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || ||||||||||| || || ||||| || || Sbjct 1684255 GGAGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGG 1684196 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||||||||| || || || || || || || | || |||| || Sbjct 1684195 AGGGATACCCTCCTTATCCTGAATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTC 1684136 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| |||| ||||| || || || || || ||||| |||||||| Sbjct 1684135 GACTTCAAGCGTAATCGTCTTCCCCGTAAGGGTCTTGACAAAGATCTGCAT 1684085 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 |||||||| || ||||| || ||||| || ||||| || || || || |||||||| | Sbjct 1684518 AGATGAAGTGTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAAC 1684459 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || ||||| ||||| ||||||||||||||||| ||||| || || ||||| || || Sbjct 1684458 TGCTTCCCAGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATC 1684399 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || ||||| || |||||||| | ||||| | || || || || || | |||||||| Sbjct 1684398 TTGGCTTTGACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCC 1684339 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 || | || || || ||||||||||| Sbjct 1684338 GTCAAAGTCTTGACGAAAATCTGCAT 1684313 Score = 154 bits (170), Expect = 4e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||||||||||||||| || || || || |||||||| | ||| || ||||| || | Sbjct 1684801 CAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCTCGA 1684742 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| |||||||| || || || || ||||| ||||||||||| || || || ||||| | Sbjct 1684741 GTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGA 1684682 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || || || | ||||| | ||| || ||||| || | ||||| | Sbjct 1684681 TCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTGC 1684622 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || || |||||||| ||||| Sbjct 1684621 CAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||| ||||||||||||||||| || |||||||||||||| Sbjct 1685105 CATTCCACCACGCAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATC 1685046 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || || || || ||||| || || ||||| || || || |||||||| Sbjct 1685045 AGAAAGAGTACGACCGTCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGG 1684986 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || ||||| || || || || || || || || | || || | || Sbjct 1684985 AGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTC 1684926 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | || || || || | || || ||||| || ||||| Sbjct 1684925 GACCTCGAGAGTGATCGTTTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 >seq25 Length=839721 Score = 134 bits (148), Expect = 4e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||| || || ||||| || |||||||| | || || ||||| || | Sbjct 326869 CAAGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCA 326928 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 ||| || ||||||||||| ||||| || || |||||||| || || || || ||||||| Sbjct 326929 ATTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAA 326988 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || ||||| || | || || | ||||| ||||| |||| ||||| | Sbjct 326989 TCTTCGCCTTCACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGC 327048 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || || || ||||||||| Sbjct 327049 CCGTCAGGGTCTTGACGAAGATCTGCATT 327077 Score = 123 bits (136), Expect = 8e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||| | || ||| || || ||||| || ||||| | || || ||||| || | Sbjct 327430 CAAGATGCAACGTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGA 327489 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || |||||||| || ||||| || |||||||| ||||| |||||||||| Sbjct 327490 GCTGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAA 327549 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| || || | || || | || || ||||| || | ||||| | Sbjct 327550 TCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCC 327609 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || || ||||| |||||||| Sbjct 327610 CCGTCAACGTCTTGACAAAGATCTGCAT 327637 Score = 111 bits (122), Expect = 5e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||| || ||| ||| || ||||| || || ||||| | || || || || || | Sbjct 327154 AGATGGAGGGTACTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAAC 327213 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || |||||||| || || || || ||||||||||| || || || || || |||||||| Sbjct 327214 TGCTTTCCAGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATC 327273 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || || ||||| || || | || || | || || || || || | ||||| ||| Sbjct 327274 TTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCG 327333 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 || | || || ||||| |||||||| Sbjct 327334 GTCAACGTCTTGACAAAGATCTGCAT 327359 Score = 107 bits (118), Expect = 6e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 || || ||||| || ||| || || ||||| || || || | || || || || || Sbjct 326584 ACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGACCGTCCTCC 326643 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 || || || || |||||||| || || ||||| || |||||||| || || ||||||||| Sbjct 326644 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGA 326703 Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 || || || || || || || || | || || | ||||| || || || | ||||| Sbjct 326704 ATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTTA 326763 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || || || ||||||||||| Sbjct 326764 CCAGTCAACGTCTTAACGAAAATCTGCAT 326792 >seq18 Length=715188 Score = 118 bits (130), Expect = 3e-21 Identities = 268/399 (67%), Gaps = 8/399 (2%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||||||||||||||| |||||| | | || |||||||| | || || | || | Sbjct 272053 CCCGAAGAAATTTCATCCATGGTTCTTCTGAAGATGAAGGAGACCGCGGAGTCCTACCTG 271994 Query 349592 GGTG-AAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | || ||||| | |||||| |||| || || || || || || || | || || Sbjct 271993 GGCGTCAATTGTAAC-AACGCTGTTGTTACCGTTCCTGCTTACTTCAACGACTCGCAACG 271935 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || || || ||||| || | || | || | || || || | || || || || Sbjct 271934 TCAGGCGACGAAGGATGCCGGAACGATCTCTGGACTGAACGTACTCCGTATCATCAACGA 271875 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATG---AGTGACCAAGaaaaaaa 349767 || |||||||| || || || || || || || |||| | | || | || || Sbjct 271874 GCCTACTGCTGCTGCTATCGCCTACGGTCTCGACAAAAAGACCACTGGC---GAGCGGAA 271818 Query 349768 TATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGA 349827 | | ||||| || ||| | || || || ||||| ||||| || || || || |||| || Sbjct 271817 TGTCCTTATATTCGATCTTGGAGGAGGCACTTTCGATGTGTCGCTGCTGACCATTGAGGA 271758 Query 349828 GGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||| || || || || || || || || ||||| || || | || || || ||||| || Sbjct 271757 GGGCATCTTCGAGGTCAAGGCTACCGCCGGTGACACTCACTTGGGCGGTGAGGATTTCGA 271698 Query 349888 TAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCG 349926 ||| || || || || || ||| | || || ||||| Sbjct 271697 TAACCGCCTAGTCAACCACTTCGTTCAGGAGTTCAAGCG 271659 Score = 113 bits (124), Expect = 1e-19 Identities = 144/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 349211 GATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATT 349270 |||| || || | |||| ||| || | |||||||||||| |||||||| || || ||| Sbjct 272430 GATTCAGTTATT-CTTACAGTTGCGTCGGTGTTTGGCAAAACGATCGTGTTGAGATCATT 272372 Query 349271 GCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGT 349330 || || || || |||||| ||||||| || |||||||| |||| |||| | ||||| Sbjct 272371 GCCAACGACCAGGGTAACCGAACAACACCCTCATACGTCTCATTCTCCGACAACGAGCGG 272312 Query 349331 ATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGAT 349390 ||||||| ||| | || || || |||| ||| || || | || || || || || Sbjct 272311 TTGATTGGCGATGCCGCGAAGAACCAAGTTGCGATGAACCCCCACAACACTGTCTTCGAC 272252 Query 349391 GCTAAGCGACTTATTGG 349407 || ||||| || ||||| Sbjct 272251 GCCAAGCGTCTCATTGG 272235 >seq4 Length=2243620 Score = 87.8 bits (96), Expect = 5e-12 Identities = 186/274 (68%), Gaps = 8/274 (3%) Strand=Plus/Minus Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 ||| || || || || || || ||||||||| ||||| || ||||||||| ||| || Sbjct 939653 TGTCCCTGCATACTTCAACGACTCCCAGCGTTTGGCAACCAAGGATGCTGGCTCCATCGC 939594 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 || | | || || | || ||||| || |||||||| || || ||||| || || || Sbjct 939593 TGGTCTCGAGGTACTCCGTATCATTAACGAGCCCACTGCCGCTGCCATTGCCTACGGTCT 939534 Query 349741 TGA---TAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || | || ||| | || || || | || || || ||| | || || || || Sbjct 939533 CGACCGTCAATCGAGCGCT---GAGAAGAACGTGCTCATCTTCGATCTGGGAGGAGGAAC 939477 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAG-GGAATTTTTGAAGTTAAAGCAACTGCTG 349856 ||| ||||| || || || | || | | | || | || | || ||||| ||||||| Sbjct 939476 TTTCGATGTCTCGCTCCTCA-ACATCACTGGCGGTGTGTTCGCTGTAAAAGCCACTGCTG 939418 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 ||||||| || | ||||| || || ||||| || Sbjct 939417 GTGATACTCACTTGGGTGGTGAGGACTTTGACAA 939384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251934396981