Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12]
127 sequences; 39,289,314 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 2e-30
seq11 109 6e-19
>seq3
Length=2745113
Score = 147 bits (162), Expect = 2e-30
Identities = 352/527 (67%), Gaps = 8/527 (2%)
Strand=Plus/Plus
Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652
|||| ||||| ||| | ||| |||||| | | |||||||| || ||| || ||
Sbjct 2542374 TGTACAAGAAGGCGGAAGCTTCCTTCTGGACTGCAGAGGAGATGGATCTCTCCAAGGATA 2542433
Query 59653 TGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGG 59709
|| | || ||| |||| | ||||| |||||||| ||||||| ||||| |
Sbjct 2542434 TGCACGACTGGAACAATCGTCTCAATGCCGACGAGCGCTTTTTCATCTCCCATGTCCTCG 2542493
Query 59710 CCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGG 59769
| || || || ||| || || || || | || || | | | | || ||||| |
Sbjct 2542494 CGTTTTTTGCCGCGTCGGACGGTATCGTCAATGAGAACCTTGTCGAGCGTTTCTCCAACG 2542553
Query 59770 ATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCC 59829
| || ||| || ||||| || | ||||||| | ||| | | ||| ||||
Sbjct 2542554 AGGTTCAGGCCGCTGAGGCACGCTGCTTCTACGGCTTCCAGATTATGATGGAGAACATCC 2542613
Query 59830 ACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTG 59889
|||||||||| |||||||| ||||||| | | ||||||| || || || |
Sbjct 2542614 ACTCCGAGACCTACTCGCTGTTGATCGACACCTATATCAAGGACCCCGAGCAGCGCGAAC 2542673
Query 59890 GTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATG 59948
|||||| ||||| ||||| |||| ||| | || | || ||||| ||||| ||
Sbjct 2542674 ACCTGTTCGACGCCATCGAGACTATCCCTTGCA-TCAAGAAGAAGGCAGACTGGGCTTTG 2542732
Query 59949 CAGTGGATGAGTC-CTGGAGCA--TCATTTGCACAACGTCTCATAGCTTTTGCATGCGTG 60005
| ||||| | | |||| || || || | ||||| | ||||| || |||
Sbjct 2542733 CGCTGGATATCTGACAAGAGCTCTTCTTTCGCTGAGCGTCTTGTGGCTTTCGCCGCCGTA 2542792
Query 60006 GAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTC 60065
|| || ||||| ||||| ||||| ||| | || ||||||||||| |||||||| |||
Sbjct 2542793 GAGGGTATCTTTTTCTCCGGCTCTTTCGCATCGATATTCTGGCTCAAGAAGCGTGGACTC 2542852
Query 60066 ATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112
||||| ||||| | ||||| |||||||| || ||| ||||||||
Sbjct 2542853 ATGCCTGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGACGAGGG 2542899
Score = 129 bits (142), Expect = 6e-25
Identities = 344/518 (66%), Gaps = 16/518 (3%)
Strand=Plus/Minus
Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC-- 59670
|| |||||| | || || ||||| ||||| || || || | || ||| || | |
Sbjct 2541033 TCTTTCTGGACAGTAGAAGAGATCGACCTATCCCATGATCTCACAGACTGGAACGACCGT 2540974
Query 59671 -TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729
||||| | |||||| | | |||||| || ||| | || |||||||| || ||
Sbjct 2540973 CTCAATGCCAACGAGCGGTACTTCATCTCGAATGTCTTAGCTTTCTTCGCCGCCTCCGAC 2540914
Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCC 59789
|| || |||| |||||| | | | | ||| || || || || || ||| |||||
Sbjct 2540913 GGCATAGTGAACGAAAATCTCGTCGAGCGCTTCTCTAACGAGGTTCAAGCTGCTGAGGCA 2540854
Query 59790 CGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTC 59849
| | ||||||| | ||| | | ||| |||||||||||||| ||||||||
Sbjct 2540853 AGATGCTTCTACGGCTTCCAGATAATGATAGAGAACATCCACTCCGAGACCTACTCGCTA 2540794
Query 59850 ATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAG 59909
| ||||| | | |||| || || || ||| | | || || |||||||
Sbjct 2540793 CTCATCGACACATACATCAAAGACCCTGACGAGCGTGATCACCTCCTCAATGCCATA--- 2540737
Query 59910 ACGTCCC--CC--GCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGG 59965
|| ||| || ||| | || | ||||| || ||||| ||| ||||| | |
Sbjct 2540736 ACCTCCATTCCTTGCA-TCAAGAAGAAAGCCGACTGGGCGCTGCGCTGGAT-ATCCGACA 2540679
Query 59966 AG-CATC---ATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCT 60021
|| | || ||||| | || ||| | ||||| || |||||||| ||||||||||
Sbjct 2540678 AGACGTCGGTATTTGGGGAGCGGCTCGTTGCTTTCGCCGCTGTGGAAGGCATCTTCTTCT 2540619
Query 60022 CTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTT 60081
| || || ||| | || ||||||||||| ||||| || |||||||| || |||| |
Sbjct 2540618 CCGGATCCTTCGCGTCAATATTCTGGCTCAAGAAGCGCGGACTCATGCCCGGGCTGACGT 2540559
Query 60082 TCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119
|||| |||||||| || ||| ||||||||| | |||
Sbjct 2540558 TCTCTAACGAGCTCATCAGCCGCGACGAGGGCATGCAT 2540521
>seq11
Length=1765784
Score = 109 bits (120), Expect = 6e-19
Identities = 141/190 (74%), Gaps = 6/190 (3%)
Strand=Plus/Minus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
||||||||||| |||||||| ||||||||||| || || | ||||||||| | ||| |||
Sbjct 1058240 TAGTACATGCCTGTCTTGAGGCCCTTCTTCCAGCCATAAAAGTGCATACTTGTCAG-TTG 1058182
Query 78259 GCCAG-ACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGA--CTGGTCGATGTACGCA 78315
|| | ||||| || || | | ||||| |||| || |||| |||| ||||
Sbjct 1058181 CCCCGTTGTCGGGGACTGCAAGTGAACGTTGA--GACTTTGACTCTGGCAGATGAACGCT 1058124
Query 78316 CCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAA 78375
|| ||||| || || | |||||||||| |||||| |||||||||| ||| |||
Sbjct 1058123 CCACGGTCCGCAGCGAGGTCGATGACCTTCTTTTGGCTGATCTCCCAGACAGTCTTGTAG 1058064
Query 78376 ATGGCCTTCA 78385
|| |||||||
Sbjct 1058063 ATCGCCTTCA 1058054
Score = 96.9 bits (106), Expect = 4e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 79699 GTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATC 79758
|| || |||||||| || || |||||||||||||| |||| ||||||| |||
Sbjct 1056514 GTGTCATAGATGCCTTCTATGGAGTCGTCCTTCATGCAAACCAAGAAGCAGGAGCTCATT 1056455
Query 79759 TGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGG 79818
|| |||||| ||||| || |||||||| ||||||| || || |||||||| || ||
Sbjct 1056454 TGAGGGTTGGGGGTACCCGCATTGAAGAGAGTCGGCGATGCATGAGTGAAGAAGCTTCGG 1056395
Query 79819 CTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCG 79878
||| || | || ||||| || ||||| | || |||||| || || || ||
Sbjct 1056394 -ACATAAGGTTATAGGTCTCGATGGCGCGCTCAATATCAGAGCCGTGAATACCCACTGCC 1056336
Query 79879 ACGCGCATGAAGAGGTACTG-GGGCGT 79904
|| ||||| || | | ||| ||||||
Sbjct 1056335 ACACGCATCAACATATGCTGAGGGCGT 1056309
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 19410 CCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGG 19469
|| |||| |||||||| ||||| |||| || | || || || | || || | ||||
Sbjct 1056669 CCAACGGCATCGTCCCGATGCTTCGCGCCTACGACGCGACTGCTCGATATGTAGATCAGG 1056728
Query 19470 GGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCA 19529
| ||| ||| || ||| | ||||| |||||| | ||||| |||||||| || ||
Sbjct 1056729 GAGGCAACAAGCGGCCCGGCGCATTCGCGATCTACATTGAGCCCTGGCACGCTGATGTTT 1056788
Query 19530 TGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCT 19589
| || |||||||| || || |||||| || | ||||| | ||| ||| || || |
Sbjct 1056789 TCGAATTCCTCGACCTTCGTAAGAACCATGGCAAAGAGGAAGTCCGCGCTCGGGATCTGT 1056848
Query 19590 TCACGGCCTTGTGGATTCCGGACCTATT 19617
| || | |||||||||||||||||
Sbjct 1056849 TTTATGCTCTTTGGATTCCGGACCTATT 1056876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548523929216880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |