Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12]
127 sequences; 39,289,314 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 3e-22
seq27 98.7 1e-15
seq11 89.7 6e-13
>seq3
Length=2745113
Score = 120 bits (132), Expect = 3e-22
Identities = 344/526 (65%), Gaps = 6/526 (1%)
Strand=Plus/Minus
Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828
|| || || | ||| || | || ||||| |||| ||||||||||| ||||||||||||
Sbjct 2542899 CCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCAGGCATGAGTCCACGCTTC 2542840
Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888
|| | ||| || || | ||| || || ||| ||||| || || || || ||
Sbjct 2542839 TTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAAAAAGATACCCTCTACGGCGGCGAAA 2542780
Query 74889 GCGACAAGGCGTTGCGCGAACG--GTGC-ATCGGAAGTCATCCAAGTCTGAGCCCATTCA 74945
|| ||||| || | ||||| | | || | | || ||||| | |||||| ||
Sbjct 2542779 GCCACAAGACGCTCAGCGAAAGAAGAGCTCTTGTCAGATATCCAGCGCAAAGCCCAGTCT 2542720
Query 74946 GCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCG 75005
|| || |||| ||||| ||| ||||| || | ||| ||| | | || |||
Sbjct 2542719 GCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGCGTCGAACAGGTGTTCGCGCTGCTCG 2542660
Query 75006 GGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTG 75065
|| ||||||| |||| |||| || ||||| ||||| || || || ||| |
Sbjct 2542659 GGGTCCTTGATATAGGTGTCGATCAACAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATC 2542600
Query 75066 AACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTC 75125
| |||| | ||||||| | || ||||| || ||| || || || || ||| |
Sbjct 2542599 ATAATCTGGAAGCCGTAGAAGCAGCGTGCCTCAGCGGCCTGAACCTCGTTGGAGAAACGC 2542540
Query 75126 ATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTG 75185
| | | ||||| ||||||| |||||||| ||||| ||||| || || || |
Sbjct 2542539 TCGACAAGGTTCTCATTGACGATACCGTCCGACGCGGCAAAAAACGCGAGGACATGGGAG 2542480
Query 75186 ATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAA 75242
|| || |||||| ||| || ||| | |||| ||| || | || ||| | | |
Sbjct 2542479 ATGAAAAAGCGCTCGTCGGCATTGAGACGATTGTTCCAGTCGTGCATATCCTTGGAGAGA 2542420
Query 75243 TCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288
|| |||||||| | |||||||| | |||||| |||||||
Sbjct 2542419 TCCATCTCCTCTGCAGTCCAGAAGGAAGCTTCCGCCTTCTTGTACA 2542374
>seq27
Length=764048
Score = 98.7 bits (108), Expect = 1e-15
Identities = 243/363 (67%), Gaps = 8/363 (2%)
Strand=Plus/Minus
Query 124674 ATCTTGCGCGTCACAAAC-TCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGAATGCC 124732
||||||||||| || ||| || | || || ||| ||||||||||||||| |||||
Sbjct 517469 ATCTTGCGCGTAACGAACGTCCGC-CCACGCCGCGGGCTCTCGTGGTTGAACAGGATGCC 517411
Query 124733 AGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATACCCAAAGAG 124792
| ||||| |||| ||||||| ||| |||||||| | || ||||| || || | ||
Sbjct 517410 GTTGCACGCGTACATACCGTACGCCTCACGGTAGTTGATGGTGATCCAGTAGCCGTACAG 517351
Query 124793 CTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCATTTTGGGTAGGTTG 124852
||| | || ||||| || ||||||||||| || || |||| | || | | |
Sbjct 517350 CTTCGCGACACCATACGGCGAGCGGGGGTAGAACGGCGTCGTTTCGCTCTGCGGCGTCTC 517291
Query 124853 CTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGATAGAATTTGAATT--TTGAAATA 124910
| ||| ||| | | ||| || || ||||| ||||| | | ||| |
Sbjct 517290 AACGACCTTTCCATAGAGCTCGGAGGTGGATGCCTGGTAGAACCGCACGTGCTTG---TC 517234
Query 124911 GAATTCGTTTG-ACGAATTGCCTCCAAGATCCGAAGGGTTCCCATGGCGTCCACATTGGC 124969
| | || | || || || |||| | || || || |||| | ||||||||| | |
Sbjct 517233 AAGTCCGCAAGTCCGGATCGCGTCCAGCAAGCGCAGCGTGCCCAGGCCGTCCACATCGCC 517174
Query 124970 GGTATACTCGGGCTGATCAAAAGACAGTTTCACATGGGACTGGGCACCTAGGTTGTACAC 125029
||| || || | | || || || | || || || ||||| ||||| |||||||||||
Sbjct 517173 GGTGTATTCTGCCATCTCGAAGGAGACCTTGACGTGCGACTGCGCACCGAGGTTGTACAC 517114
Query 125030 CTC 125032
|||
Sbjct 517113 CTC 517111
>seq11
Length=1765784
Score = 89.7 bits (98), Expect = 6e-13
Identities = 154/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530
|| || |||||| | || | || ||||| || ||||| |||| || | || || ||
Sbjct 1056653 GGAACCAACGGCTACTCCAACGGCATCGTCCCGATGCTTCGCGCCTACGACGCGACTGCT 1056712
Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590
|| || || | ||||| || ||||| || | ||||| |||||| | |||||
Sbjct 1056713 CGATATGTAGATCAGGGAGGCAACAAGCGGCCCGGCGCATTCGCGATCTACATTGAGCCC 1056772
Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650
|||||||| || || | || || ||||| || ||| ||| || || | || || |
Sbjct 1056773 TGGCACGCTGATGTTTTCGAATTCCTCGACCTTCGTAAGAACCATGGCAAAGAGGAAGTC 1056832
Query 53651 CGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTT 53694
||| || || |||||| ||||| |||||||||||||| ||
Sbjct 1056833 CGCGCTCGGGATCTGTTTTATGCTCTTTGGATTCCGGACCTATT 1056876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215131294600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |