Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 120 3e-22 seq27 98.7 1e-15 seq11 89.7 6e-13 >seq3 Length=2745113 Score = 120 bits (132), Expect = 3e-22 Identities = 344/526 (65%), Gaps = 6/526 (1%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || || || | ||| || | || ||||| |||| ||||||||||| |||||||||||| Sbjct 2542899 CCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCAGGCATGAGTCCACGCTTC 2542840 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 || | ||| || || | ||| || || ||| ||||| || || || || || Sbjct 2542839 TTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAAAAAGATACCCTCTACGGCGGCGAAA 2542780 Query 74889 GCGACAAGGCGTTGCGCGAACG--GTGC-ATCGGAAGTCATCCAAGTCTGAGCCCATTCA 74945 || ||||| || | ||||| | | || | | || ||||| | |||||| || Sbjct 2542779 GCCACAAGACGCTCAGCGAAAGAAGAGCTCTTGTCAGATATCCAGCGCAAAGCCCAGTCT 2542720 Query 74946 GCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCG 75005 || || |||| ||||| ||| ||||| || | ||| ||| | | || ||| Sbjct 2542719 GCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGCGTCGAACAGGTGTTCGCGCTGCTCG 2542660 Query 75006 GGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTG 75065 || ||||||| |||| |||| || ||||| ||||| || || || ||| | Sbjct 2542659 GGGTCCTTGATATAGGTGTCGATCAACAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATC 2542600 Query 75066 AACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTC 75125 | |||| | ||||||| | || ||||| || ||| || || || || ||| | Sbjct 2542599 ATAATCTGGAAGCCGTAGAAGCAGCGTGCCTCAGCGGCCTGAACCTCGTTGGAGAAACGC 2542540 Query 75126 ATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTG 75185 | | | ||||| ||||||| |||||||| ||||| ||||| || || || | Sbjct 2542539 TCGACAAGGTTCTCATTGACGATACCGTCCGACGCGGCAAAAAACGCGAGGACATGGGAG 2542480 Query 75186 ATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAA 75242 || || |||||| ||| || ||| | |||| ||| || | || ||| | | | Sbjct 2542479 ATGAAAAAGCGCTCGTCGGCATTGAGACGATTGTTCCAGTCGTGCATATCCTTGGAGAGA 2542420 Query 75243 TCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288 || |||||||| | |||||||| | |||||| ||||||| Sbjct 2542419 TCCATCTCCTCTGCAGTCCAGAAGGAAGCTTCCGCCTTCTTGTACA 2542374 >seq27 Length=764048 Score = 98.7 bits (108), Expect = 1e-15 Identities = 243/363 (67%), Gaps = 8/363 (2%) Strand=Plus/Minus Query 124674 ATCTTGCGCGTCACAAAC-TCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGAATGCC 124732 ||||||||||| || ||| || | || || ||| ||||||||||||||| ||||| Sbjct 517469 ATCTTGCGCGTAACGAACGTCCGC-CCACGCCGCGGGCTCTCGTGGTTGAACAGGATGCC 517411 Query 124733 AGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATACCCAAAGAG 124792 | ||||| |||| ||||||| ||| |||||||| | || ||||| || || | || Sbjct 517410 GTTGCACGCGTACATACCGTACGCCTCACGGTAGTTGATGGTGATCCAGTAGCCGTACAG 517351 Query 124793 CTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCATTTTGGGTAGGTTG 124852 ||| | || ||||| || ||||||||||| || || |||| | || | | | Sbjct 517350 CTTCGCGACACCATACGGCGAGCGGGGGTAGAACGGCGTCGTTTCGCTCTGCGGCGTCTC 517291 Query 124853 CTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGATAGAATTTGAATT--TTGAAATA 124910 | ||| ||| | | ||| || || ||||| ||||| | | ||| | Sbjct 517290 AACGACCTTTCCATAGAGCTCGGAGGTGGATGCCTGGTAGAACCGCACGTGCTTG---TC 517234 Query 124911 GAATTCGTTTG-ACGAATTGCCTCCAAGATCCGAAGGGTTCCCATGGCGTCCACATTGGC 124969 | | || | || || || |||| | || || || |||| | ||||||||| | | Sbjct 517233 AAGTCCGCAAGTCCGGATCGCGTCCAGCAAGCGCAGCGTGCCCAGGCCGTCCACATCGCC 517174 Query 124970 GGTATACTCGGGCTGATCAAAAGACAGTTTCACATGGGACTGGGCACCTAGGTTGTACAC 125029 ||| || || | | || || || | || || || ||||| ||||| ||||||||||| Sbjct 517173 GGTGTATTCTGCCATCTCGAAGGAGACCTTGACGTGCGACTGCGCACCGAGGTTGTACAC 517114 Query 125030 CTC 125032 ||| Sbjct 517113 CTC 517111 >seq11 Length=1765784 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530 || || |||||| | || | || ||||| || ||||| |||| || | || || || Sbjct 1056653 GGAACCAACGGCTACTCCAACGGCATCGTCCCGATGCTTCGCGCCTACGACGCGACTGCT 1056712 Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590 || || || | ||||| || ||||| || | ||||| |||||| | ||||| Sbjct 1056713 CGATATGTAGATCAGGGAGGCAACAAGCGGCCCGGCGCATTCGCGATCTACATTGAGCCC 1056772 Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650 |||||||| || || | || || ||||| || ||| ||| || || | || || | Sbjct 1056773 TGGCACGCTGATGTTTTCGAATTCCTCGACCTTCGTAAGAACCATGGCAAAGAGGAAGTC 1056832 Query 53651 CGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTT 53694 ||| || || |||||| ||||| |||||||||||||| || Sbjct 1056833 CGCGCTCGGGATCTGTTTTATGCTCTTTGGATTCCGGACCTATT 1056876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215131294600