Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 187 3e-42 seq25 176 5e-39 seq11 161 1e-34 seq27 98.7 1e-15 >seq1 Length=3640883 Score = 187 bits (206), Expect = 3e-42 Identities = 165/206 (80%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| | || ||||||||||| ||||||||||| || || | Sbjct 1684594 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACTCTTGAGGTCGAATCTTCT 1684653 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || || |||||||||||||| |||||||| |||||| Sbjct 1684654 GACACAATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 1684713 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| ||||| |||||||||||||||| |||||| || | || || || Sbjct 1684714 CAGCGCCTGATTTTCGCTGGAAAGCAACTCGAGGATGGTCGTACACTTTCTGATTACAAC 1684773 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || ||||||||||| Sbjct 1684774 ATCCAGAAGGAGTCTACTCTTCATCT 1684799 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| || ||||| ||||| ||||| || |||||| Sbjct 1684085 ATGCAGATCTTTGTCAAGACCCTTACGGGGAAGACGATTACGCTTGAAGTCGAGTCATCC 1684144 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || |||||||| |||||||| || ||||| |||||| Sbjct 1684145 GACACAATCGACAACGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 1684204 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| ||||| |||||||| | || ||||| | ||||| || Sbjct 1684205 CAGCGCCTCATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 1684264 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || |||||||| || | ||||| || || || Sbjct 1684265 ATTCAGAAGGAGTCTACCCTTCATCTCGTTCTTCGTCTGCGTGGCGG 1684311 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| | || || || || || ||||| ||||| ||||| Sbjct 1684875 ATGCAAATCTTTGTGAAGACCTTGACAGGGAAAACGATCACTCTCGAGGTCGAGTCTTCC 1684934 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || |||||||||||||| || ||||| || || Sbjct 1684935 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAA 1684994 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || || || |||||||| | |||||| || | || |||||| Sbjct 1684995 CAGCGCCTGATCTTCGCCGGCAAACAGCTCGAGGACGGTCGTACTCTTTCTGATTATAAT 1685054 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| || ||||||||||| || | ||||| || |||||| Sbjct 1685055 ATTCAGAAGGAGTCTACTCTTCATCTCGTTCTTCGTCTGCGTGGTGGA 1685102 Score = 136 bits (150), Expect = 5e-27 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| |||||||| || || |||||||| || | ||||| ||||| Sbjct 1685102 AATGCAGATCTTTGTGAAGACGCTGACGGGGAAGACTATCACCTTGGAGGTCGAGTCGTC 1685161 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| || ||||||| || || ||||||||||| || |||||||| || || Sbjct 1685162 GGATACAATTGACAACGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCA 1685221 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || ||||| ||||| | ||||| | ||||| || | || ||||| Sbjct 1685222 GCAGCGTCTCATCTTCGCTGGAAAGCAGTTGGAGGACGGGCGTACGCTCTCCGATTATAA 1685281 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || ||||||||||| ||||| Sbjct 1683802 ATGCAGATCTTCGTGAAGACACTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCG 1683861 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | || | || | |||||||| |||||||||||||| || Sbjct 1683862 GACACTATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGG 1683905 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 3580997 ATGCAAATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 3580938 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| | || || || ||||| || |||||||| Sbjct 3580937 GACACCATCGACAATGTCAAAGCCAAGATTCAAGATAAGGAGGG 3580894 >seq25 Length=839721 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || |||||| | || || ||||| || || || ||||||||||| Sbjct 326792 ATGCAGATTTTCGTTAAGACGTTGACTGGTAAGACGATCACCCTCGAGGTTGAGTCGTCG 326733 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || |||||||| |||||||| |||||||| |||||| Sbjct 326732 GACACCATCGACAACGTCAAGGCGAAGATTCAGGATAAGGAGGGCATTCCTCCGGACCAG 326673 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| || ||||| | |||||| || | ||||| ||| Sbjct 326672 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTTTCCGACTACAAT 326613 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||| ||||| || ||||||||||| |||||||| Sbjct 326612 ATCCAGAAGGAGAGCACGCTTCACCTGGTCTTGCGTCTCCGCGGTGG 326566 Score = 176 bits (194), Expect = 5e-39 Identities = 163/207 (79%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| || || |||||||| |||||||||||||||||||| Sbjct 327077 AATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTC 327018 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || ||||||| || ||||||||||||||||| || ||||| ||||| Sbjct 327017 GGACACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCA 326958 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||||| || |||||||| |||||| | ||||||| ||| || || | || || || Sbjct 326957 ACAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTACAA 326898 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCT 27611 | || |||||| |||||| || || Sbjct 326897 CATTCAGAAGGAAAGCACTCTCCACCT 326871 Score = 159 bits (176), Expect = 4e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||||||| | || || |||||||| || |||||||| ||||| Sbjct 327637 ATGCAGATCTTTGTCAAGACGTTGACGGGGAAGACTATCACCCTTGAGGTGGAGTCCTCC 327578 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || |||||||| ||||| || |||||||| |||||| Sbjct 327577 GACACCATCGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCTCCCGACCAG 327518 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| ||||| || || || ||||| |||||||||| || || || | ||||| ||| Sbjct 327517 CAGCGCCTAATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTACAAT 327458 Query 27586 GTCCAAAAGGA 27596 |||| ||||| Sbjct 327457 ATCCAGAAGGA 327447 Score = 150 bits (166), Expect = 2e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||||||| | ||||| ||||| || ||||| ||||| ||||| Sbjct 327359 ATGCAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACTCTCGAGGTCGAGTCCTCC 327300 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||||| || ||||||||||||||||| || || || || ||| Sbjct 327299 GACACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 327240 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| ||||| ||||| | ||||| | |||||| || | ||||| || Sbjct 327239 CAGCGCCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACTCTTTCTGACTACAAC 327180 Query 27586 GTCCAAAAGGA 27596 | || ||||| Sbjct 327179 ATTCAGAAGGA 327169 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || ||||||||||| || || || ||||| ||||| Sbjct 327978 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 327919 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| ||| | ||| | ||||| || || |||||||||||||| Sbjct 327918 GATACCATCGACAATGTTAAGGCGAAGATCCAGGACAAGGAGGG 327875 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 |||| ||||| ||||||||||| || || || |||||||||||||||||||| | || | Sbjct 327820 GAATCCCTCCCGACCAGCAGCGCCTGATCTTCGCTGGTAAGCAACTCGAGGACGGCCGCA 327761 Query 27569 CCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCT 27611 | || | ||||| ||| |||| ||||| ||| || ||||| Sbjct 327760 CTCTCTCGGACTACAATATCCAGAAGGAGAGCACACTCCATCT 327718 >seq11 Length=1765784 Score = 161 bits (178), Expect = 1e-34 Identities = 324/478 (68%), Gaps = 2/478 (0%) Strand=Plus/Minus Query 80538 ACCCCACATGTCGTGCTGCAAGATGCCCTCC-GACGCCGGAGACCCCGCGAACGTCTCGT 80596 |||||||| |||| ||| | | || ||| ||||| ||| ||| || ||||||||| Sbjct 1057686 ACCCCACAGATCGTACTGTA-GTTGTCCTTTTGACGCAGGACTACCCTCGTACGTCTCGT 1057628 Query 80597 ACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACT 80656 |||| || || || | |||| |||| | || || || ||||| || ||| || Sbjct 1057627 ACGGCCCGTCTGTTTCAGCCATATCACTACTCGCCTCAACCGCGGCGTGGTAGATGGTCT 1057568 Query 80657 CAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716 | |||| | ||| | | |||||||| || |||||| | || | | | || Sbjct 1057567 CGAAGATCTGTTGGTTGAGCCGGCGCGCCTCGGGCGAGTCGAAAGGCATACGGAGCGCCA 1057508 Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776 ||||| |||||| || ||||| ||||| | | ||||||||||| |||||||| || | Sbjct 1057507 TGAACGTGTCAGCGAGACCCTGCACGCCAACACCAATCGGGCGGTGACGCTTGTTGGACC 1057448 Query 80777 GCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836 ||||||| || ||||||||||| |||| |||||||| ||||| |||||| | || Sbjct 1057447 GCTCGGCTTCAGGAATTGGGTAGTAGTTGGCATCGATGATCCGGTTAAGGTTGAACGCAA 1057388 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACAAATGCCG 80896 ||||| || ||| || || | || || || | || | | ||| || || | | Sbjct 1057387 CAACCTTTGCAACGTCGTGCAACTTTTGGAAATTATATCTGCCCTCCTCTACGAAGGAGG 1057328 Query 80897 GAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGA 80956 | || | ||| || || ||||| || || ||| || | | |||||| || Sbjct 1057327 GGAGAGCGATGGAGGCGAGGTTGCAGACAGCAGTCTCATCTGGTGAGGAGTACTCGATGA 1057268 Query 80957 TTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGC 81014 | || ||||| | ||| || ||||| || || || || || | |||||| |||||||| Sbjct 1057267 TCTCTGTGCAAAGATTGGAGGACTTGATAGTGCCGAGATTCTGCTGGTTGGACTTGGC 1057210 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 81541 TTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTT 81600 |||| ||| ||||| || || || ||| || | |||||| || |||||| ||| Sbjct 1056520 TTCAAGGTGTCATAGATGCCTTCTATGGAGTCGTCCTTCATGCAAACCAAGAAGCAGGAG 1056461 Query 81601 GACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAA 81660 ||| |||||| | | || |||||||| || || || | || ||| |||| | Sbjct 1056460 CTCATTTGAGGGTTGGGGGTACCCGCATTGAAGAGAGTCGGCGATGCATGAGTGAAGAAG 1056401 Query 81661 CGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCG 81720 | | ||||| |||| |||||| || || |||| |||||| ||||||||||| Sbjct 1056400 CT-TCGGACATAAGGTTATAGGTCTCGATGGCGCGCTCAATATCAGAGCCGTGAATACCC 1056342 Query 81721 ATAGCTACACGCATAAACATGTACTG-GGGCGTCTCGCCTG 81760 | || |||||||| ||||| | ||| |||||| ||| ||| Sbjct 1056341 ACTGCCACACGCATCAACATATGCTGAGGGCGT-TCGGCTG 1056302 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80035 CGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATA 80094 ||||| || || ||||||||||| ||||||||||||||||||||||| || | ||||||| Sbjct 1058252 CGCGTGCGAAGGTAGTACATGCCTGTCTTGAGGCCCTTCTTCCAGCCATAAAAGTGCATA 1058193 Query 80095 GAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAG 80154 | || | | | ||| ||| || || | | ||| ||| ||| ||| ||| Sbjct 1058192 CTTGTCAGTTGCCCCGTTGTCGGGGACTGCAAGTGAACGTTGAGACTTTGACTCTGGCAG 1058133 Query 80155 ATGAAAGCCCCACGATCTGCCGC 80177 ||||| || ||||| || || || Sbjct 1058132 ATGAACGCTCCACGGTCCGCAGC 1058110 >seq27 Length=764048 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 24744 GAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGA 24803 ||| | | ||| ||||| |||||||| ||| || || || || || || || || Sbjct 517270 GAGCTCTATGGAAAGGTCGTTGAGACGCCGCAGAGCGAAACGACGCCGTTCTACCCCCGC 517329 Query 24804 AGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCC 24863 |||||||| ||| | ||| ||| || |||||||| |||| |||||||||||||| Sbjct 517330 TCGCCGTATGGTGTCGCGAAGCTGTACGGCTACTGGATCACCATCAACTACCGTGAGGCG 517389 Query 24864 CATGGGATATATGCATGCAACGGAATTCTGTTCAACCATGAG 24905 | || || || || |||||||| || ||||||||||| ||| Sbjct 517390 TACGGTATGTACGCGTGCAACGGCATCCTGTTCAACCACGAG 517431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309494632240