Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 122 8e-23 seq25 120 3e-22 >seq1 Length=3640883 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| || ||| | || || || || ||||| | || Sbjct 1684313 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACGATCACGCTGGAGGTGGAGTCCTCT 1684372 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || ||||| || || ||||| || || ||||| Sbjct 1684373 GACACAATTGATAACGTCAAAGCCAAGATCCAAGATAAGGAGGGCATTCCCCCTGATCAG 1684432 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| || || || |||||||| || ||| | || ||||||||| Sbjct 1684433 CAACGTCTCATCTTCGCTGGGAAGCAGTTGGAAGATGGTCGGACGTTGTCGGATTACAAC 1684492 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||| ||||||||||| Sbjct 1684493 ATTCAGAAGGAGTCGAC 1684509 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||| || || | || ||||| || || || | ||| Sbjct 1684875 ATGCAAATCTTTGTGAAGACCTTGACAGGGAAAACGATCACTCTCGAGGTCGAGTCTTCC 1684934 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || || |||||| Sbjct 1684935 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAA 1684994 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||||||| | || ||| || || |||| ||||| || Sbjct 1684995 CAGCGCCTGATCTTCGCCGGCAAACAGCTCGAGGACGGTCGTACTCTTTCTGATTATAAT 1685054 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | ||| | ||| | ||| |||| ||||| || Sbjct 1685055 ATTCAGAAGGAGTCTACTCTTCATCTCGTTCTTCGTCTGCGTGGTGGAAT 1685104 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || ||| | ||||| |||||||| || | ||| Sbjct 1684085 ATGCAGATCTTTGTCAAGACCCTTACGGGGAAGACGATTACGCTTGAAGTCGAGTCATCC 1684144 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||| || || || || || || ||||| || Sbjct 1684145 GACACAATCGACAACGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 1684204 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || | || ||| | ||| | ||||| |||||| Sbjct 1684205 CAGCGCCTCATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 1684264 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | ||| | ||| | ||| |||| || || || Sbjct 1684265 ATTCAGAAGGAGTCTACCCTTCATCTCGTTCTTCGTCTGCGTGGCGGTAT 1684314 Score = 105 bits (116), Expect = 6e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| |||| |||||| |||| |||||||| || ||| | || Sbjct 1684594 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACTCTTGAGGTCGAATCTTCT 1684653 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| || || ||||| || || || || || || || Sbjct 1684654 GACACAATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 1684713 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || ||| | || || || || |||| ||||||||| Sbjct 1684714 CAGCGCCTGATTTTCGCTGGAAAGCAACTCGAGGATGGTCGTACACTTTCTGATTACAAC 1684773 Query 27168 ATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 || || |||||||| || | ||| ||||| Sbjct 1684774 ATCCAGAAGGAGTCTACTCTTCATCTTGGT 1684803 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/128 (76%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 27091 GCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGA 27150 |||| || || || |||||||| || || | ||| ||||| || ||||||| | || Sbjct 1683960 GCATTCCTCCTGACCAACAGCGCTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGC-CGC 1684018 Query 27151 CCGTT-TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGG 27209 |||| ||||| ||||||||||| ||||||||||| | || ||||| | ||| |||| Sbjct 1684019 ACGTTGTCCGACTACAACATTCAGAAGGAGTCGACACTCCACTTGGTCCTCCGTCTGCGT 1684078 Query 27210 GGTGGCAT 27217 ||||| || Sbjct 1684079 GGTGGTAT 1684086 >seq25 Length=839721 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| |||||| | ||||||||||| || || |||| Sbjct 327076 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACTCTTGAGGTTGAGTCGTCG 327017 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| || ||||| || || || ||| Sbjct 327016 GACACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAA 326957 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| |||||||| || || || | || ||||||||| Sbjct 326956 CAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGATGGTCGCACGCTCTCTGATTACAAC 326897 Query 27168 ATTCAAAAGGA 27178 ||||| ||||| Sbjct 326896 ATTCAGAAGGA 326886 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||||| ||| | || ||||| || || || | ||| Sbjct 327359 ATGCAGATCTTTGTCAAGACGTTGACCGGGAAGACCATCACTCTCGAGGTCGAGTCCTCC 327300 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| || || || || || ||||| Sbjct 327299 GACACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 327240 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || ||||| ||| || || |||| || |||||| Sbjct 327239 CAGCGCCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACTCTTTCTGACTACAAC 327180 Query 27168 ATTCAAAAGGAG 27179 ||||| |||||| Sbjct 327179 ATTCAGAAGGAG 327168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917709567040