Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 187 6e-42 seq25 165 2e-35 seq6 87.8 4e-12 >seq1 Length=3640883 Score = 187 bits (206), Expect = 6e-42 Identities = 166/208 (80%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| |||||||| ||||| || |||||||| ||||| | ||| || | ||||| || | Sbjct 1684801 CAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCTCGA 1684742 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 | ||||| || ||||| || ||||| || ||||||||||||| || ||||||||||||| Sbjct 1684741 GTTGCTTTCCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGA 1684682 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| |||||||| ||||| |||||||| ||| ||||| |||||||| ||||| | Sbjct 1684681 TCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTTGC 1684622 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | |||||| ||||| | ||||| Sbjct 1684621 CAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || ||||| || ||||| || || ||||| ||||||| | |||| |||||||||| | Sbjct 1684518 AGATGAAGTGTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAAC 1684459 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || |||||||| || ||||| || ||||| |||| || ||||| || |||||| Sbjct 1684458 TGCTTCCCAGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATC 1684399 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || ||| ||||| || || ||||||||| || ||||| || ||||||||||||||| Sbjct 1684398 TTGGCTTTGACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCC 1684339 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || | |||||| || || | |||||| Sbjct 1684338 GTCAAAGTCTTGACGAAAATCTGCAT 1684313 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || |||||||| ||||| || || || |||||||| | ||| || | || || Sbjct 1685086 AGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGAAAGAGTACGACCGTCC 1685027 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| ||||| |||||||| ||||| ||||| |||||||| | || ||||||||| Sbjct 1685026 TCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGGGATGCCCTCCTTGTCC 1684967 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||||||||||||||| Sbjct 1684966 TGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATCGTT 1684907 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | ||||| Sbjct 1684906 TTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||||||||| || |||||| || ||||||||||| | || || | || || |||| Sbjct 1685310 CAAGGTGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCA 1685251 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||| || |||||||| || || || || || ||||||| |||||||||||||||| Sbjct 1685250 ACTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGA 1685191 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| |||||||| || || || || || || ||||| | ||||| ||||| | Sbjct 1685190 TCTTTGCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCC 1685131 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||| || ||||| ||||| | ||||||| Sbjct 1685130 CCGTCAGCGTCTTCACAAAGATCTGCATT 1685102 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| || || ||||| || || | | || | |||||| Sbjct 1684068 AGGACCAAGTGGAGTGTCGACTCCTTCTGAATGTTGTAGTCGGACAACGTGCGGCCATCT 1684009 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 |||||||||||||| |||||||| | ||| |||||||||||||||| Sbjct 1684008 TCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCAGGAGGAA 1683963 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||| ||||| || ||||| ||||| ||||| || || ||||| Sbjct 1683905 CCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCGATAGTGTCCGAAGACTCGACCTCA 1683846 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 |||||||| ||||| || ||||| ||||| || || | |||||| || || Sbjct 1683845 AGAGTGATGGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCATGTTGTG 1683796 >seq25 Length=839721 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| |||||| || || || ||||| ||||| | || || | ||||| |||| Sbjct 326869 CAAGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCA 326928 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||| || ||||| || || |||||||||||||| | || ||||||||||| | Sbjct 326929 ATTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAA 326988 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| |||||||| ||||||||||| || |||||||| ||||| |||||||| | Sbjct 326989 TCTTCGCCTTCACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGC 327048 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||| || ||||| || || | ||||||| Sbjct 327049 CCGTCAGGGTCTTGACGAAGATCTGCATT 327077 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| |||||||| ||| ||| || ||||| || || || | ||| || | || || || Sbjct 326583 GACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGACCGTCCTC 326642 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 |||||||||||| || ||||| ||||| || ||||| ||||||| || ||||| ||||| Sbjct 326643 CAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTG 326702 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| || ||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct 326703 AATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTT 326762 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | ||||| || || | |||||| Sbjct 326763 ACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| || | ||| ||| || ||||| || || || | ||| || | ||||| || | Sbjct 327430 CAAGATGCAACGTGCTCTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGA 327489 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| |||||||| ||||| || ||||| ||||||| |||||||| ||||| | Sbjct 327490 GCTGCTTGCCCGCGAAGATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAA 327549 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || || || ||||||||||| ||| || ||||| || ||||| ||||| | Sbjct 327550 TCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCC 327609 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| | ||||| ||||| | |||||| Sbjct 327610 CCGTCAACGTCTTGACAAAGATCTGCAT 327637 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 210923 CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982 ||| || || ||||| || || | ||| || | || || |||| |||||| || ||||| Sbjct 327168 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCAGCGAA 327227 Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042 || ||||| || || ||||| || | || ||||||||||| ||||| ||||| || Sbjct 327228 AATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTCACATT 327287 Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||||||||| ||| || |||||||||||||| ||||| || || | ||||| || Sbjct 327288 GTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAACGTCTTGAC 327347 Query 211103 AAACACCTGCAT 211114 ||| | |||||| Sbjct 327348 AAAGATCTGCAT 327359 Score = 93.3 bits (102), Expect = 1e-13 Identities = 94/122 (77%), Gaps = 3/122 (2%) Strand=Plus/Plus Query 211003 GAGGAACTC---CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGC 211059 ||||||||| | ||||||||||||||||| || || || |||||||| || || Sbjct 327864 GAGGAACTCACCCCTCCTTGTCCTGGATCTTCGCCTTAACATTGTCGATGGTATCGGACG 327923 Query 211060 TTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTAT 211119 || |||||||| ||||| ||||| || ||||| ||||| ||||| | |||||| ||| Sbjct 327924 ACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGCTAT 327983 Query 211120 GG 211121 || Sbjct 327984 GG 327985 >seq6 Length=2010026 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/105 (80%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 || || || || || |||||||| || |||||||| ||||| | ||| | | | ||||| Sbjct 1330048 AGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGCTCAAAG-TGCGACCATC 1330106 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct 1330107 CTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGG 1330151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150113842355