Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 141 2e-28 seq25 129 1e-24 seq6 98.7 2e-15 >seq1 Length=3640883 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || || || || || || || || | |||||||| | ||| || | |||||||| | | Sbjct 1684518 AGATGAAGTGTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAAC 1684459 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||||||||||||||| || ||||| || || || ||||| || ||||| ||||||||| Sbjct 1684458 TGCTTCCCAGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATC 1684399 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || || || || || ||||| |||| ||||| || | |||||||||||| ||| Sbjct 1684398 TTGGCTTTGACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCC 1684339 Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| || | ||| | ||||| Sbjct 1684338 GTCAAAGTCTTGACGAAAATCTGCAT 1684313 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| || || ||||| || | || ||||||| | || | ||| || || | Sbjct 1685310 CAAGGTGAAGGGTACTCTCTTTCTGAATGTTATAATCGGAGAGCGTACGCCCGTCCTCCA 1685251 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 |||||| ||||||||||| || || || || || || ||||| ||||||||||| |||| Sbjct 1685250 ACTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGGA 1685191 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 ||||| |||||| || || || || || | || || || || ||||| ||||| | Sbjct 1685190 TCTTTGCCTTCACGTTGTCAATTGTATCCGACGACTCGACCTCCAAGGTGATAGTCTTCC 1685131 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||| || || | || | |||||| Sbjct 1685130 CCGTCAGCGTCTTCACAAAGATCTGCATT 1685102 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || || || || || || || | ||||| |||| | || | || || Sbjct 1684296 AGAACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1684237 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||||||||| ||||| || || || |||||||| || ||||| ||||| || Sbjct 1684236 TCGAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTATCC 1684177 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| |||||| ||||| ||||| || | || || || | ||| |||||| Sbjct 1684176 TGAATCTTTGCCTTCACGTTGTCGATTGTGTCGGATGACTCGACTTCAAGCGTAATCGTC 1684117 Query 225682 TTGCCCGT 225689 || ||||| Sbjct 1684116 TTCCCCGT 1684109 Score = 107 bits (118), Expect = 5e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || ||||| || || || || | ||| ||||| | | ||| | || || Sbjct 1685086 AGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGAAAGAGTACGACCGTCC 1685027 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || || ||||| || || || || || |||||||| Sbjct 1685026 TCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGGGATGCCCTCCTTGTCC 1684967 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | || || || | |||||||| Sbjct 1684966 TGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATCGTT 1684907 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | || | |||||| Sbjct 1684906 TTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | |||||| || || || || || | ||||| |||| ||| || | |||||| Sbjct 1684068 AGGACCAAGTGGAGTGTCGACTCCTTCTGAATGTTGTAGTCGGACAACGTGCGGCCATCT 1684009 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || |||||||| ||||||||||| | || |||||||| || ||||| Sbjct 1684008 TCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCAGGAGGAAT 1683962 >seq25 Length=839721 Score = 129 bits (142), Expect = 1e-24 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 || || |||| |||||| || | | ||| | ||||| || |||||||| || |||||| Sbjct 327447 TCCTTCTGGATATTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAG 327506 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 || || || || |||||||| ||||| |||||||| || || ||||| ||| ||| Sbjct 327507 ATTAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTG 327566 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||||||||| |||| ||||| || | ||||| ||||| |||||||| || || Sbjct 327567 TCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATAGTCTTCCCCGTCAACGTCTT 327622 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||||||||||||| ||| || || | |||||||| | | || | ||||| || | Sbjct 326869 CAAGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCA 326928 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||| ||||| ||||| || || |||||||| || || || || |||||||| || | Sbjct 326929 ATTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAA 326988 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| |||||| ||||||||||| || | || || || | || |||||||||| Sbjct 326989 TCTTCGCCTTCACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGC 327048 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||| || || | ||| | |||||| Sbjct 327049 CCGTCAGGGTCTTGACGAAGATCTGCATT 327077 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | || ||| ||||| || ||| || || |||| |||||| |||| | || Sbjct 326572 CGGAGACGCAAGACCAGGTGAAGCGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTA 326631 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || || ||||| || || || ||||| || ||||| || Sbjct 326632 CGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCC 326691 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| || || ||||| ||| || ||||||||||| || | || || || | Sbjct 326692 TCCTTATCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCGAGG 326751 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || ||||| || || | ||| | ||||| Sbjct 326752 GTGATCGTCTTACCAGTCAACGTCTTAACGAAAATCTGCAT 326792 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| || | | ||| | || || || | |||||| |||||||| || || || || Sbjct 327181 TTGTAGTCAGAAAGAGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGGCGCTGC 327240 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 || || || || ||||| |||||||| || ||||| ||||||| ||||||||||| Sbjct 327241 TGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTGTCG 327300 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 |||| || || || | ||||| ||||| || ||||| || || Sbjct 327301 GAGGACTCGACCTCGAGAGTGATGGTCTTCCCGGTCAACGTCTT 327344 >seq6 Length=2010026 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||| ||||| || || |||| ||||||||| |||||| | ||||| Sbjct 1330048 AGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGCTCAAAGTGCGACCATCC 1330107 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || |||||||| ||||||||||| || || ||||||||||| || |||| Sbjct 1330108 TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATAC 1330156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529259528138