Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3 172 5e-38 >seq3 Length=2745113 Score = 172 bits (190), Expect = 5e-38 Identities = 373/555 (67%), Gaps = 15/555 (3%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 |||||| || || ||||| || ||||| | ||| || || |||||||| ||||| | Sbjct 2540506 ACACGCGAAGTCGGTATGCATGCCCTCGTCGCGGCTGATGAGCTCGTTAGAGAACGTCAG 2540565 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 |||||||| | || | ||| || ||||| ||||| | || || || || || ||||| Sbjct 2540566 CCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAATATTGACGCGAAGGATCCGGAGAAGAA 2540625 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAA---CGAGCTGGCTTTGTC 4723 |||||||| || ||||| || || || | || ||| || ||| | ||||| Sbjct 2540626 GATGCCTTCCACAGCGGCGAAAGCAACGAGCCGCTCCCCAAATACCGACGTC---TTGTC 2540682 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 ||||| | ||||||| ||||| ||||| | ||| ||||| | | ||| || Sbjct 2540683 GGATATCCAGCGCAGCGCCCAGTCGGCTTTCTTCTTGATGCAAGGAATGGAGGTTATGGC 2540742 Query 4784 GTTAAATAATTTA---CTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 || | | | | | | ||| ||||||| || || ||||| || ||||| Sbjct 2540743 ATTGAGGAGGTGATCACGCTCGTCA---GGGTCTTTGATGTATGTGTCGATGAGTAGCGA 2540799 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 || | || || || || || ||||| ||||| || ||||| |||||||| || || Sbjct 2540800 GTAGGTCTCGGAGTGGATGTTCTCTATCATTATCTGGAAGCCGTAGAAGCATCTTGCCTC 2540859 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 | ||||||| |||||| | || | || || | |||||||| ||||| ||||| Sbjct 2540860 AGCAGCTTGAACCTCGTTAGAGAAGCGCTCGACGAGATTTTCGTTCACTATGCCGTCGGA 2540919 Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TT 5017 ||| || || || || || |||| || || |||||| | |||| | || || | Sbjct 2540920 GGCGGCGAAGAAAGCTAAGACATTCGAGATGAAGTACCGCTCGTTGGCATTGAGACGGTC 2540979 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077 ||||||| | | ||| | | || || | ||||| || ||||| || || ||||| Sbjct 2540980 GTTCCAGTCTGTGAGATCATGGGATAGGTCGATCTCTTCTACTGTCCAGAAAGATGCTTC 2541039 Query 5078 CGCTTTTTTGTACAT 5092 |||||||||||||| Sbjct 2541040 TGCTTTTTTGTACAT 2541054 Score = 134 bits (148), Expect = 1e-26 Identities = 358/545 (66%), Gaps = 9/545 (2%) Strand=Plus/Minus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| ||| ||||| | ||| || || ||||| || ||||| | || ||||| | || Sbjct 2542905 TGCATACCCTCGTCACGGCTGATGAGCTCGTTCGAGAACGTGAGGCCAGGCATGAGTCCA 2542846 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||| || ||||| ||||| | || || || || || || || || || ||||||||| Sbjct 2542845 CGCTTCTTGAGCCAGAATATCGATGCGAAAGAGCCGGAGAAAAAGATACCCTCTACGGCG 2542786 Query 4683 GCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCC 4742 || || || || | || |||| || | ||||| ||||| || ||| Sbjct 2542785 GCGAAAGCCACAAGACGCTCAGCGAAAGAAGAGCTCTTGTCAGATATCCAGCGCAAAGCC 2542726 Query 4743 CAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA---TTTACTT 4799 |||| || || ||||| | ||| || || || | || |||| || | || | Sbjct 2542725 CAGTCTGCCTTCTTCTTGATGCAAGGGATAGTCTCGATGGCGTCGAACAGGTGTTCGCGC 2542666 Query 4800 TTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATA 4859 | || ||||| | ||||| ||||| || | || || | || || || || Sbjct 2542665 TGCTCG---GGGTCCTTGATATAGGTGTCGATCAACAGCGAGTAGGTCTCGGAGTGGATG 2542609 Query 4860 TTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTA 4919 || || || |||||| || ||||| ||||| | || || | | ||||| ||||| Sbjct 2542608 TTCTCCATCATAATCTGGAAGCCGTAGAAGCAGCGTGCCTCAGCGGCCTGAACCTCGTTG 2542549 Query 4920 CAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAA 4979 | || | || || | ||| || || || |||||||| || ||||||||||| | Sbjct 2542548 GAGAAACGCTCGACAAGGTTCTCATTGACGATACCGTCCGACGCGGCAAAAAACGCGAGG 2542489 Query 4980 ACATGAGATATAAAGTACTGTTCGTCAGGCTT---AAGTTTTTTCCAGTGGGGCAAATCT 5036 ||||| || || || | | ||||| | || | | || ||||||| | ||| ||| Sbjct 2542488 ACATGGGAGATGAAAAAGCGCTCGTCGGCATTGAGACGATTGTTCCAGTCGTGCATATCC 2542429 Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGAC 5096 || | | ||| | || || ||||||| || || |||||||| || |||||||| | Sbjct 2542428 TTGGAGAGATCCATCTCCTCTGCAGTCCAGAAGGAAGCTTCCGCCTTCTTGTACATGTTC 2542369 Query 5097 CAAAT 5101 ||||| Sbjct 2542368 CAAAT 2542364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048939007291