Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3 122 1e-22 >seq3 Length=2745113 Score = 122 bits (134), Expect = 1e-22 Identities = 376/580 (65%), Gaps = 14/580 (2%) Strand=Plus/Minus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||| | || | | |||||| || || || | ||| || || | || || | Sbjct 2542939 CAAATGGCTGAAAAGCAGACATGCGAAGTCGGTGTGCATACCCTCGTCACGGCTGATGAG 2542880 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 ||||| || || ||||| || ||||| |||||||| || |||||||| ||||| | || Sbjct 2542879 CTCGTTCGAGAACGTGAGGCCAGGCATGAGTCCACGCTTCTTGAGCCAGAATATCGATGC 2542820 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301 |||||| || || || || || || |||||||| || || || ||| | ||| || | Sbjct 2542819 GAAAGAGCCGGAGAAAAAGATACCCTCTACGGCGGCGAAAGCCACAAGACGCTCAGCGAA 2542760 Query 48302 ACTGGCTTCGTTGTG---TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 | | |||| |||||| || ||||| || ||||||||||| | ||||| Sbjct 2542759 AGAAGAGCTCTTGTCAGATATCCAGCGCAAAGCCCAGTCTGCCTTCTTCTTGATGCAAGG 2542700 Query 48359 CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCT----ATCTTTAACGTAAG 48414 || || || || || | | | || | || | |||| || || | || | Sbjct 2542699 GATAGTCTCGATGGCGTCGA----ACAGGTGTTCGCGCTGCTCGGGGTCCTTGATATAGG 2542644 Query 48415 TATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGT 48474 | || || || || || | |||||||| || || || || ||||| || |||| Sbjct 2542643 TGTCGATCAACAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGT 2542584 Query 48475 AAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCAT 48534 | || || | || || | | ||| ||||| | | || || || | | ||||||| Sbjct 2542583 AGAAGCAGCGTGCCTCAGCGGCCTGAACCTCGTTGGAGAAACGCTCGACAAGGTTCTCAT 2542524 Query 48535 TTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGT 48594 | || || || || || |||||||| || | ||||| || ||| | |||| Sbjct 2542523 TGACGATACCGTCCGACGCGGCAAAAAACGCGAGGACATGGGAGATGAAAAAGCGCTCGT 2542464 Query 48595 TGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 48651 || | | | | || |||||||| | ||||| || || | ||| | || || || | Sbjct 2542463 CGGCATTGAGACGATTGTTCCAGTCGTGCATATCCTTGGAGAGATCCATCTCCTCTGCAG 2542404 Query 48652 TCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 |||| || || || || || || || ||||| ||||| || Sbjct 2542403 TCCAGAAGGAAGCTTCCGCCTTCTTGTACATGTTCCAAAT 2542364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667697213280