Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12]
127 sequences; 39,289,314 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 1e-22
>seq3
Length=2745113
Score = 122 bits (134), Expect = 1e-22
Identities = 376/580 (65%), Gaps = 14/580 (2%)
Strand=Plus/Minus
Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181
|||||| | || | | |||||| || || || | ||| || || | || || |
Sbjct 2542939 CAAATGGCTGAAAAGCAGACATGCGAAGTCGGTGTGCATACCCTCGTCACGGCTGATGAG 2542880
Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241
||||| || || ||||| || ||||| |||||||| || |||||||| ||||| | ||
Sbjct 2542879 CTCGTTCGAGAACGTGAGGCCAGGCATGAGTCCACGCTTCTTGAGCCAGAATATCGATGC 2542820
Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301
|||||| || || || || || || |||||||| || || || ||| | ||| || |
Sbjct 2542819 GAAAGAGCCGGAGAAAAAGATACCCTCTACGGCGGCGAAAGCCACAAGACGCTCAGCGAA 2542760
Query 48302 ACTGGCTTCGTTGTG---TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358
| | |||| |||||| || ||||| || ||||||||||| | |||||
Sbjct 2542759 AGAAGAGCTCTTGTCAGATATCCAGCGCAAAGCCCAGTCTGCCTTCTTCTTGATGCAAGG 2542700
Query 48359 CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCT----ATCTTTAACGTAAG 48414
|| || || || || | | | || | || | |||| || || | || |
Sbjct 2542699 GATAGTCTCGATGGCGTCGA----ACAGGTGTTCGCGCTGCTCGGGGTCCTTGATATAGG 2542644
Query 48415 TATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGT 48474
| || || || || || | |||||||| || || || || ||||| || ||||
Sbjct 2542643 TGTCGATCAACAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGT 2542584
Query 48475 AAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCAT 48534
| || || | || || | | ||| ||||| | | || || || | | |||||||
Sbjct 2542583 AGAAGCAGCGTGCCTCAGCGGCCTGAACCTCGTTGGAGAAACGCTCGACAAGGTTCTCAT 2542524
Query 48535 TTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGT 48594
| || || || || || |||||||| || | ||||| || ||| | ||||
Sbjct 2542523 TGACGATACCGTCCGACGCGGCAAAAAACGCGAGGACATGGGAGATGAAAAAGCGCTCGT 2542464
Query 48595 TGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTG 48651
|| | | | | || |||||||| | ||||| || || | ||| | || || || |
Sbjct 2542463 CGGCATTGAGACGATTGTTCCAGTCGTGCATATCCTTGGAGAGATCCATCTCCTCTGCAG 2542404
Query 48652 TCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
|||| || || || || || || || ||||| ||||| ||
Sbjct 2542403 TCCAGAAGGAAGCTTCCGCCTTCTTGTACATGTTCCAAAT 2542364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694667697213280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |