Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grifola_20frondosa_20[genbank_20GCA_5F001683735.1_202016-07-12] 127 sequences; 39,289,314 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 113 1e-19 seq25 93.3 1e-13 >seq1 Length=3640883 Score = 113 bits (124), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 ||||||||||||||||||| || |||||||||||||| | | || | ||||| || | Sbjct 1684801 CAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGTGTACGACCATCCTCGA 1684742 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || ||||| || || | ||||||||| | | || || ||||| || || Sbjct 1684741 GTTGCTTT--CCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTG 1684684 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || ||| || || | || | |||| ||| || || |||||||| ||||| || Sbjct 1684683 GATCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGACCTCAAGAGTGATAGTCTT 1684624 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || | ||||||||| || | ||||| Sbjct 1684623 GCCAGTCAAAGTCTTCACAAAAATTTGCAT 1684594 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||||||||||||||| || || || || ||||| | | ||| | || || Sbjct 1685086 AGAACGAGATGAAGAGTAGACTCCTTCTGAATATTATAATCAGAAAGAGTACGACCGTCC 1685027 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||||||||| || | ||| || || | | ||| || ||||| || Sbjct 1685026 TCGAGCTGTTTGCCGGCGAAGATCAGGCGCTGTTGATCAGGAGGGATGCCCTCCTTGTCC 1684967 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | |||| ||| ||| || || ||||| || ||| Sbjct 1684966 TGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATCGTT 1684907 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | |||||||| |||| ||||| Sbjct 1684906 TTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 1684875 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 |||||||| || ||||| || || ||||||||||| | || || | |||||||| | Sbjct 1684518 AGATGAAGTGTCGACTCCTTCTGAATGTTGTAATCCGACAACGTCCGACCATCTTCCAAC 1684459 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 ||||| |||||||| || | ||||| || | | || || ||||| ||||| || Sbjct 1684458 TGCTTCCCAGCGAAGATGAGACGTTGCTGATCAGGGGGAATGCCCTCCTTATCTTGGATC 1684399 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || |||||| | || | |||| || ||| || || || || || || || ||| Sbjct 1684398 TTGGCTTTGACGTTATCAATTGTGTCAGAGGACTCCACCTCCAGCGTGATCGTCTTTCCC 1684339 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || | |||||| ||||| | |||||| Sbjct 1684338 GTCAAAGTCTTGACGAAAATCTGCAT 1684313 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060 || ||||| |||||||| || ||||||| | || | | |||| ||| ||| || ||| Sbjct 3580894 CCCTCCTTATCTTGAATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCA 3580953 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || ||||| ||||||||||| ||||| ||||||| ||||| || Sbjct 3580954 AGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCATCTT 3581000 >seq25 Length=839721 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || || || ||||||||||| | | || | ||||| || | Sbjct 326869 CAAGGTGGAGAGTGCTTTCCTTCTGAATGTTGTAATCAGAGAGCGTGCGACCATCCTCCA 326928 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| || | ||| ||||| | | ||| || ||||| || |||| Sbjct 326929 ATTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAA 326988 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | |||| || ||| || ||||||||||| || |||| Sbjct 326989 TCTTCGCCTTCACGTTATCGATGGTGTCCGACGACTCAACCTCAAGAGTAATCGTCTTGC 327048 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||| || ||||| ||||||| ||||||| Sbjct 327049 CCGTCAGGGTCTTGACGAAGATCTGCATT 327077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818922517217